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    pasilla RNA-binding protein Nova-1-like protein passilla [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1273071, updated on 3-Dec-2024

    Summary

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    Gene symbol
    pasilla
    Gene description
    RNA-binding protein Nova-1-like protein passilla
    See related
    VectorBase:AGAMI1_008037
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP002896
    Orthologs
    fruit fly all
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    Genomic context

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    See pasilla in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (28838854..28914674, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene probable cytochrome P450 6d5 Neighboring gene methyltransferase like 3 Neighboring gene uncharacterized LOC133391135 Neighboring gene uncharacterized LOC11175566 Neighboring gene probable maleylacetoacetate isomerase 2 Neighboring gene uncharacterized LOC11175873

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein Pasilla
    Names
    AGAP002896-PA
    RNA-binding protein Nova

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      28838854..28914674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061642123.1 → XP_061498107.1  RNA-binding protein Pasilla isoform X8

      UniProtKB/TrEMBL
      A0A2C9GXB5

    2. XM_061642122.1 → XP_061498106.1  RNA-binding protein Pasilla isoform X7

      UniProtKB/TrEMBL
      A0A2C9GXB5

    3. XM_061642114.1 → XP_061498098.1  RNA-binding protein Pasilla isoform X5

      UniProtKB/TrEMBL
      A0A2C9GXB5

    4. XM_061642127.1 → XP_061498111.1  RNA-binding protein Pasilla isoform X10

      UniProtKB/TrEMBL
      A0A2C9GXB5

    5. XM_061642129.1 → XP_061498113.1  RNA-binding protein Pasilla isoform X10

      UniProtKB/TrEMBL
      A0A2C9GXB5

    6. XM_061642120.1 → XP_061498104.1  RNA-binding protein Pasilla isoform X5

      UniProtKB/TrEMBL
      A0A2C9GXB5

    7. XM_061642117.1 → XP_061498101.1  RNA-binding protein Pasilla isoform X5

      UniProtKB/TrEMBL
      A0A2C9GXB5

    8. XM_061642118.1 → XP_061498102.1  RNA-binding protein Pasilla isoform X5

      UniProtKB/TrEMBL
      A0A2C9GXB5

    9. XM_061642116.1 → XP_061498100.1  RNA-binding protein Pasilla isoform X5

      UniProtKB/TrEMBL
      A0A2C9GXB5

    10. XM_061642130.1 → XP_061498114.1  RNA-binding protein Pasilla isoform X10

      UniProtKB/TrEMBL
      A0A2C9GXB5

    11. XM_061642128.1 → XP_061498112.1  RNA-binding protein Pasilla isoform X10

      UniProtKB/TrEMBL
      A0A2C9GXB5

    12. XM_061642115.1 → XP_061498099.1  RNA-binding protein Pasilla isoform X5

      UniProtKB/TrEMBL
      A0A2C9GXB5

    13. XM_061642119.1 → XP_061498103.1  RNA-binding protein Pasilla isoform X5

      UniProtKB/TrEMBL
      A0A2C9GXB5

    14. XM_061642106.1 → XP_061498090.1  RNA-binding protein Pasilla isoform X1

    15. XM_061642105.1 → XP_061498089.1  RNA-binding protein Pasilla isoform X1

    16. XM_061642108.1 → XP_061498092.1  RNA-binding protein Pasilla isoform X1

    17. XM_061642107.1 → XP_061498091.1  RNA-binding protein Pasilla isoform X1

    18. XM_061642133.1 → XP_061498117.1  RNA-binding protein Pasilla isoform X6

      UniProtKB/TrEMBL
      A0A1S4GG92, Q7QD06

    19. XM_061642103.1 → XP_061498087.1  RNA-binding protein Pasilla isoform X1

    20. XM_061642102.1 → XP_061498086.1  RNA-binding protein Pasilla isoform X1

    21. XM_061642126.1 → XP_061498110.1  RNA-binding protein Pasilla isoform X9

      UniProtKB/TrEMBL
      A0A2C9GXC1, Q7QD06

    22. XM_061642132.1 → XP_061498116.1  RNA-binding protein Pasilla isoform X11

      UniProtKB/TrEMBL
      Q7QD06

    23. XM_061642134.1 → XP_061498118.1  RNA-binding protein Pasilla isoform X11

      UniProtKB/TrEMBL
      Q7QD06

    24. XM_061642124.1 → XP_061498108.1  RNA-binding protein Pasilla isoform X9

      UniProtKB/TrEMBL
      A0A2C9GXC1, Q7QD06

    25. XM_061642109.1 → XP_061498093.1  RNA-binding protein Pasilla isoform X2

    26. XM_061642104.1 → XP_061498088.1  RNA-binding protein Pasilla isoform X1

    27. XM_061642110.1 → XP_061498094.1  RNA-binding protein Pasilla isoform X2

    28. XM_061642121.1 → XP_061498105.1  RNA-binding protein Pasilla isoform X6

      UniProtKB/TrEMBL
      A0A1S4GG92, Q7QD06

    29. XM_061642111.1 → XP_061498095.1  RNA-binding protein Pasilla isoform X2

    30. XM_061642125.1 → XP_061498109.1  RNA-binding protein Pasilla isoform X9

      UniProtKB/TrEMBL
      A0A2C9GXC1, Q7QD06

    31. XM_061642131.1 → XP_061498115.1  RNA-binding protein Pasilla isoform X11

      UniProtKB/TrEMBL
      Q7QD06

    32. XM_061642135.1 → XP_061498119.1  RNA-binding protein Pasilla isoform X12

      UniProtKB/TrEMBL
      Q7QD06

    33. XM_061642112.1 → XP_061498096.1  RNA-binding protein Pasilla isoform X3

    34. XM_061642136.1 → XP_061498120.1  RNA-binding protein Pasilla isoform X13

      UniProtKB/TrEMBL
      Q7QD06

    35. XM_061642113.1 → XP_061498097.1  RNA-binding protein Pasilla isoform X4

    36. XM_061642137.1 → XP_061498121.1  RNA-binding protein Pasilla isoform X14

      UniProtKB/TrEMBL
      Q7QD06
    Nucleotide Protein Strain
    Heading Accession and Version

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