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    RpL6 ribosomal protein L6 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1281215, updated on 22-Jun-2024

    Summary

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    Gene symbol
    RpL6
    Gene description
    ribosomal protein L6
    See related
    VectorBase:AGAMI1_008744
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP001911
    Orthologs
    fruit fly all
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    Genomic context

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    See RpL6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (11759231..11760414)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene dihydroxyacetone phosphate acyltransferase Neighboring gene ribosomal protein S6 kinase delta-1 Neighboring gene odorant receptor 85c Neighboring gene ribosomal protein S3 Neighboring gene Gustatory and odorant receptor 24 Neighboring gene cell division cycle protein 37 Neighboring gene uncharacterized LOC1281209

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal large subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein eL6
    Names
    60S ribosomal protein L6
    AGAP001911-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      11759231..11760414
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_321154.6 → XP_321154.5  large ribosomal subunit protein eL6

      See identical proteins and their annotated locations for XP_321154.5

      UniProtKB/TrEMBL
      Q7PYF2
      Conserved Domains (1) summary
      cd13156
      Location:115 → 270
      KOW_RPL6; KOW motif of Ribosomal Protein L6
    Nucleotide Protein Strain
    Heading Accession and Version

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