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    Rab39 RAS oncogene family member Rab39 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1271812, updated on 22-Jun-2024

    Summary

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    Gene symbol
    Rab39
    Gene description
    RAS oncogene family member Rab39
    See related
    VectorBase:AGAMI1_003074
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP000433
    Orthologs
    fruit fly all
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    Genomic context

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    See Rab39 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (7747986..7753462, complement)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene doublesex-Mab related 99B Neighboring gene protein C19orf12 homolog Neighboring gene catalytic subunit 3A of the oligosaccharyltransferase complex Neighboring gene chitinase-3-like protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rab protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-39B
    Names
    AGAP000433-PA
    AGAP000433-PB
    Ras-related protein Rab-39B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      7747986..7753462 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_310666.6 → XP_310666.5  ras-related protein Rab-39B

      See identical proteins and their annotated locations for XP_310666.5

      UniProtKB/TrEMBL
      F5HJJ3, Q7PS26
      Conserved Domains (1) summary
      cd04111
      Location:8 → 219
      Rab39; Rab GTPase family 39 (Rab39)

    2. XM_003436944.2 → XP_003436992.1  ras-related protein Rab-39B

      See identical proteins and their annotated locations for XP_003436992.1

      UniProtKB/TrEMBL
      F5HJJ3, Q7PS26
      Conserved Domains (1) summary
      cd04111
      Location:8 → 219
      Rab39; Rab GTPase family 39 (Rab39)

    3. XM_061645818.1 → XP_061501802.1  ras-related protein Rab-39B

      UniProtKB/TrEMBL
      F5HJJ3, Q7PS26

    4. XM_061645825.1 → XP_061501809.1  ras-related protein Rab-39B

      UniProtKB/TrEMBL
      F5HJJ3, Q7PS26
    Nucleotide Protein Strain
    Heading Accession and Version

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