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    Pmp70 ATP binding cassette subfamily D member Pmp70 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1271802, updated on 22-Jun-2024

    Summary

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    Gene symbol
    Pmp70
    Gene description
    ATP binding cassette subfamily D member Pmp70
    See related
    VectorBase:AGAMI1_007811
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    ABCD2; AGAP000440
    Orthologs
    fruit fly all
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    Genomic context

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    See Pmp70 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (7831433..7840815)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene pterin-4-alpha-carbinolamine dehydratase Neighboring gene Nitrogen permease regulator-like 2 Neighboring gene nuclear transcription factor Y subunit gamma Neighboring gene uncharacterized LOC1271796 Neighboring gene cytosolic iron-sulfur assembly component 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables long-chain fatty acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in long-chain fatty acid import into peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peroxisome organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATP-binding cassette sub-family D member 3
    Names
    AGAP000440-PA
    ATP-binding cassette transporter (ABC transporter) family D member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      7831433..7840815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061659219.1 → XP_061515203.1  ATP-binding cassette sub-family D member 3

      UniProtKB/TrEMBL
      Q7QFE4

    2. XM_310656.4 → XP_310656.2  ATP-binding cassette sub-family D member 3

      See identical proteins and their annotated locations for XP_310656.2

      UniProtKB/TrEMBL
      Q7QFE4
      Conserved Domains (1) summary
      TIGR00954
      Location:34 → 647
      3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
    Nucleotide Protein Strain
    Heading Accession and Version

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