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    hfw leucine-rich repeat domain-containing protein hfw [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1271627, updated on 22-Jun-2024

    Summary

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    Gene symbol
    hfw
    Gene description
    leucine-rich repeat domain-containing protein hfw
    See related
    VectorBase:AGAMI1_006465
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP000601
    Orthologs
    fruit fly all
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    Genomic context

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    See hfw in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (10753177..10760378)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene NFU1 iron-sulfur cluster scaffold homolog, mitochondrial Neighboring gene XK-related protein 6 Neighboring gene uncharacterized LOC11175737 Neighboring gene vacuolar protein sorting 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables potassium channel activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transmembrane transporter binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein halfway
    Names
    AGAP000601-PA
    AGAP000601-PB
    LRRNT domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      10753177..10760378
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061660235.1 → XP_061516219.1  protein halfway

      UniProtKB/TrEMBL
      F5HJE2, Q7QFP4

    2. XM_061660250.1 → XP_061516234.1  protein halfway

      UniProtKB/TrEMBL
      F5HJE2, Q7QFP4

    3. XM_061660262.1 → XP_061516246.1  protein halfway

      UniProtKB/TrEMBL
      F5HJE2, Q7QFP4

    4. XM_061660243.1 → XP_061516227.1  protein halfway

      UniProtKB/TrEMBL
      F5HJE2, Q7QFP4

    5. XM_061660248.1 → XP_061516232.1  protein halfway

      UniProtKB/TrEMBL
      F5HJE2, Q7QFP4

    6. XM_061660267.1 → XP_061516251.1  protein halfway

      UniProtKB/TrEMBL
      F5HJE2, Q7QFP4

    7. XM_003436995.2 → XP_003437043.1  protein halfway

      See identical proteins and their annotated locations for XP_003437043.1

      UniProtKB/TrEMBL
      F5HJE2, Q7QFP4
      Conserved Domains (5) summary
      smart00013
      Location:416 → 461
      LRRNT; Leucine rich repeat N-terminal domain
      COG4886
      Location:304 → 544
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:312 → 332
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:312 → 348
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:288 → 343
      LRR_8; Leucine rich repeat

    8. XM_061660227.1 → XP_061516211.1  protein halfway

      UniProtKB/TrEMBL
      F5HJE2, Q7QFP4
    Nucleotide Protein Strain
    Heading Accession and Version

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