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    PF3D7_0729500 mRNA (N6-adenosine)-methyltransferase, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 2655176, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_0729500
    Gene description
    mRNA (N6-adenosine)-methyltransferase, putative
    Locus tag
    PF3D7_0729500
    See related
    PlasmoDB:PF3D7_0729500; VEuPathDB:PF3D7_0729500
    Gene type
    protein coding
    RNA name
    mRNA (N6-adenosine)-methyltransferase, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_0729500 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Sequence:
    Chromosome: 7; NC_004328.3 (1255371..1257653)

    Chromosome 7 - NC_004328.3Genomic Context describing neighboring genes Neighboring gene 60S ribosomal export protein NMD3, putative Neighboring gene ribosome biogenesis protein BRX1, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene conserved protein, unknown function

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004328.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome-wide dynamics of extensive m(6)A mRNA methylation during Plasmodium falciparum blood-stage development. Baumgarten S, et al. Nat Microbiol, 2019 Dec. PMID 31384004, Free PMC Article
    2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables mRNA m(6)A methyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within mRNA modification IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA N6-methyladenosine methyltransferase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mRNA (N6-adenosine)-methyltransferase, putative
    XP_001349190.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004328.3 Reference assembly

      Range
      1255371..1257653
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001349154.1 → XP_001349190.1  mRNA (N6-adenosine)-methyltransferase, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001349190.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024VU67, Q8I6Z2, W4IJP3, W7G8D6, W7K6Z8
      Conserved Domains (1) summary
      COG4725
      Location:553 → 749
      IME4; N6-adenosine-specific RNA methylase IME4 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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