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    LOC1276826 deubiquitinase OTUD6B [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1276826, updated on 22-Jun-2024

    Summary

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    Gene symbol
    LOC1276826
    Gene description
    deubiquitinase OTUD6B
    See related
    VectorBase:AGAMI1_011004
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP006160
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1276826 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (96349950..96351256)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 31 Neighboring gene uncharacterized LOC133391015 Neighboring gene RAS oncogene family member RabX1 Neighboring gene protein SGT1 homolog Neighboring gene deoxyribonuclease TATDN1 Neighboring gene uncharacterized LOC1276829 Neighboring gene Rad51 recombinase D

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    deubiquitinase OTUD6B
    Names
    AGAP006160-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      96349950..96351256
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_316218.5 → XP_316218.4  deubiquitinase OTUD6B

      See identical proteins and their annotated locations for XP_316218.4

      UniProtKB/TrEMBL
      Q7Q5X0
      Conserved Domains (2) summary
      COG5539
      Location:1 → 296
      COG5539; Predicted cysteine protease (OTU family) [Posttranslational modification, protein turnover, chaperones]
      pfam02338
      Location:167 → 294
      OTU; OTU-like cysteine protease
    Nucleotide Protein Strain
    Heading Accession and Version

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