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    Set1 SET domain containing 1 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1269315, updated on 3-Dec-2024

    Summary

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    Gene symbol
    Set1
    Gene description
    SET domain containing 1
    See related
    VectorBase:AGAMI1_003504
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP002246
    Orthologs
    fruit fly all
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    Genomic context

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    See Set1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (17717211..17724802)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene rabankyrin-5 Neighboring gene uncharacterized LOC5667558 Neighboring gene Ubiquinol-cytochrome c reductase 11 kDa subunit Neighboring gene protein claret segregational Neighboring gene mediator complex subunit 21

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone H3K4 methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Set1C/COMPASS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    histone-lysine N-methyltransferase SETD1
    Names
    AGAP002246-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      17717211..17724802
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_307938.6 → XP_307938.6  histone-lysine N-methyltransferase SETD1

      UniProtKB/TrEMBL
      Q7QKB2

    2. XM_061641333.1 → XP_061497317.1  histone-lysine N-methyltransferase SETD1

      UniProtKB/TrEMBL
      Q7QKB2
    Nucleotide Protein Strain
    Heading Accession and Version

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