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    LOC1281318 tropomyosin-2 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1281318, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC1281318
    Gene description
    tropomyosin-2
    See related
    VectorBase:AGAMI1_014929
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP001797
    Orthologs
    fruit fly all
    NEW
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    Genomic context

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    See LOC1281318 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (10270381..10315880)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133391115 Neighboring gene putative peptidyl-tRNA hydrolase PTRHD1 Neighboring gene MORF-related gene 15 Neighboring gene modular serine protease Neighboring gene tropomyosin-1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cingulin; tropomyosin; tropomyosin-1, isoforms 9A/A/B; tropomyosin-2; uncharacterized protein LOC1281318
    Names
    AGAP001797-PA
    AGAP001797-PB
    AGAP001797-PC
    AGAP001797-PD
    AGAP001797-PE
    AGAP001797-PF
    AGAP001797-PG
    AGAP001797-PH
    AGAP001797-PI
    AGAP001797-PJ
    Tropomyosin 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      10270381..10315880
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003435893.2 → XP_003435941.1  tropomyosin-2 isoform X24

      See identical proteins and their annotated locations for XP_003435941.1

      UniProtKB/TrEMBL
      F5HME9
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    2. XM_061649416.1 → XP_061505400.1  tropomyosin-2 isoform X29

    3. XM_061649398.1 → XP_061505382.1  tropomyosin-2 isoform X20

    4. XM_061649415.1 → XP_061505399.1  tropomyosin-2 isoform X28

    5. XM_061649417.1 → XP_061505401.1  tropomyosin isoform X30

    6. XM_061649411.1 → XP_061505395.1  tropomyosin-2 isoform X25

    7. XM_061649392.1 → XP_061505376.1  tropomyosin-2 isoform X19

    8. XM_061649414.1 → XP_061505398.1  tropomyosin-2 isoform X27

    9. XM_061649412.1 → XP_061505396.1  tropomyosin-2 isoform X26

    10. XM_061649394.1 → XP_061505378.1  tropomyosin-2 isoform X19

    11. XM_061649397.1 → XP_061505381.1  tropomyosin-2 isoform X19

    12. XM_061649408.1 → XP_061505392.1  tropomyosin-2 isoform X24

      UniProtKB/TrEMBL
      F5HME9

    13. XM_003435892.2 → XP_003435940.1  tropomyosin-2 isoform X24

      See identical proteins and their annotated locations for XP_003435940.1

      UniProtKB/TrEMBL
      F5HME9
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    14. XM_003435891.2 → XP_003435939.1  tropomyosin-2 isoform X24

      See identical proteins and their annotated locations for XP_003435939.1

      UniProtKB/TrEMBL
      F5HME9
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    15. XM_061649409.1 → XP_061505393.1  tropomyosin-2 isoform X24

      UniProtKB/TrEMBL
      F5HME9

    16. XM_003435890.2 → XP_003435938.1  tropomyosin-2 isoform X24

      See identical proteins and their annotated locations for XP_003435938.1

      UniProtKB/TrEMBL
      F5HME9
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin

    17. XM_061649410.1 → XP_061505394.1  tropomyosin-2 isoform X24

      UniProtKB/TrEMBL
      F5HME9

    18. XM_061649395.1 → XP_061505379.1  tropomyosin-2 isoform X19

    19. XM_061649393.1 → XP_061505377.1  tropomyosin-2 isoform X19

    20. XM_061649396.1 → XP_061505380.1  tropomyosin-2 isoform X19

    21. XM_061649391.1 → XP_061505375.1  uncharacterized protein LOC1281318 isoform X18

      UniProtKB/TrEMBL
      Q380N3

    22. XM_061649389.1 → XP_061505373.1  uncharacterized protein LOC1281318 isoform X17

    23. XM_061649388.1 → XP_061505372.1  uncharacterized protein LOC1281318 isoform X16

      UniProtKB/TrEMBL
      Q380N3

    24. XM_061649377.1 → XP_061505361.1  uncharacterized protein LOC1281318 isoform X6

    25. XM_061649376.1 → XP_061505360.1  uncharacterized protein LOC1281318 isoform X5

    26. XM_061649372.1 → XP_061505356.1  uncharacterized protein LOC1281318 isoform X2

      UniProtKB/TrEMBL
      Q380N3

    27. XM_061649384.1 → XP_061505368.1  uncharacterized protein LOC1281318 isoform X12

      UniProtKB/TrEMBL
      Q380N3

    28. XM_061649375.1 → XP_061505359.1  uncharacterized protein LOC1281318 isoform X4

      UniProtKB/TrEMBL
      Q380N3

    29. XM_061649374.1 → XP_061505358.1  uncharacterized protein LOC1281318 isoform X3

      UniProtKB/TrEMBL
      Q380N3

    30. XM_061649387.1 → XP_061505371.1  uncharacterized protein LOC1281318 isoform X15

      UniProtKB/TrEMBL
      Q380N3

    31. XM_061649371.1 → XP_061505355.1  uncharacterized protein LOC1281318 isoform X1

      UniProtKB/TrEMBL
      Q380N3

    32. XM_061649382.1 → XP_061505366.1  uncharacterized protein LOC1281318 isoform X10

      UniProtKB/TrEMBL
      Q380N3

    33. XM_061649386.1 → XP_061505370.1  uncharacterized protein LOC1281318 isoform X14

      UniProtKB/TrEMBL
      Q380N3

    34. XM_061649385.1 → XP_061505369.1  uncharacterized protein LOC1281318 isoform X13

      UniProtKB/TrEMBL
      Q380N3

    35. XM_061649380.1 → XP_061505364.1  uncharacterized protein LOC1281318 isoform X8

      UniProtKB/TrEMBL
      Q380N3

    36. XM_061649378.1 → XP_061505362.1  cingulin isoform X7

      UniProtKB/TrEMBL
      Q380N3

    37. XM_061649381.1 → XP_061505365.1  cingulin isoform X9

      UniProtKB/TrEMBL
      Q380N3

    38. XM_061649383.1 → XP_061505367.1  cingulin isoform X11

    39. XM_003435896.2 → XP_003435944.1  tropomyosin-1, isoforms 9A/A/B isoform X32

      See identical proteins and their annotated locations for XP_003435944.1

      UniProtKB/TrEMBL
      F5HMF3
      Conserved Domains (1) summary
      pfam00261
      Location:18 → 252
      Tropomyosin

    40. XM_061649407.1 → XP_061505391.1  tropomyosin-1, isoforms 9A/A/B isoform X23

    41. XM_003435894.2 → XP_003435942.1  tropomyosin-1, isoforms 9A/A/B isoform X33

      See identical proteins and their annotated locations for XP_003435942.1

      UniProtKB/TrEMBL
      F5HME5
      Conserved Domains (2) summary
      PHA03248
      Location:64 → 172
      PHA03248; DNA packaging tegument protein UL25; Provisional
      pfam00261
      Location:18 → 252
      Tropomyosin; Tropomyosin

    42. XM_003435897.2 → XP_003435945.1  tropomyosin-1, isoforms 9A/A/B isoform X34

      See identical proteins and their annotated locations for XP_003435945.1

      UniProtKB/TrEMBL
      F5HMF1
      Conserved Domains (1) summary
      pfam00261
      Location:18 → 252
      Tropomyosin

    43. XM_061649401.1 → XP_061505385.1  tropomyosin-1, isoforms 9A/A/B isoform X22

    44. XM_061649418.1 → XP_061505402.1  tropomyosin-1, isoforms 9A/A/B isoform X31

    45. XM_061649399.1 → XP_061505383.1  tropomyosin-1, isoforms 9A/A/B isoform X21

    46. XM_061649403.1 → XP_061505387.1  tropomyosin-1, isoforms 9A/A/B isoform X22

    47. XM_061649405.1 → XP_061505389.1  tropomyosin-1, isoforms 9A/A/B isoform X23

    48. XM_061649402.1 → XP_061505386.1  tropomyosin-1, isoforms 9A/A/B isoform X22

    49. XM_061649404.1 → XP_061505388.1  tropomyosin-1, isoforms 9A/A/B isoform X22

    50. XM_061649400.1 → XP_061505384.1  tropomyosin-1, isoforms 9A/A/B isoform X21

    Nucleotide Protein Strain
    Heading Accession and Version

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