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    wupA wings up A [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1276006, updated on 22-Jun-2024

    Summary

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    Gene symbol
    wupA
    Gene description
    wings up A
    See related
    VectorBase:AGAMI1_008299
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP001053
    Orthologs
    fruit fly all
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    Genomic context

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    See wupA in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) X NC_064600.1 (20817636..20842017, complement)

    Chromosome X - NC_064600.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC133391282 Neighboring gene uncharacterized LOC133391233 Neighboring gene uncharacterized LOC133391284 Neighboring gene uncharacterized LOC133391287

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064600.1 Chromosome X Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pilot Anopheles gambiae full-length cDNA study: sequencing and initial characterization of 35,575 clones. Gomez SM, et al. Genome Biol, 2005. PMID 15833126, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of troponin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    troponin I
    Names
    AGAP001053-PA
    AGAP001053-PB
    AGAP001053-PC
    AGAP001053-PD
    AGAP001053-PE
    AGAP001053-PF
    AGAP001053-PG
    AGAP001053-PH

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064600.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      20817636..20842017 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003437143.2 → XP_003437191.1  troponin I isoform X1

      See identical proteins and their annotated locations for XP_003437191.1

      UniProtKB/TrEMBL
      F5HLV8
      Conserved Domains (1) summary
      pfam00992
      Location:55 → 173
      Troponin

    2. XM_003437144.2 → XP_003437192.1  troponin I isoform X1

      See identical proteins and their annotated locations for XP_003437192.1

      UniProtKB/TrEMBL
      F5HLV8
      Conserved Domains (1) summary
      pfam00992
      Location:55 → 173
      Troponin

    3. XM_001688576.3 → XP_001688628.1  troponin I isoform X4

      See identical proteins and their annotated locations for XP_001688628.1

      UniProtKB/TrEMBL
      A7UTK6, Q3B716
      Conserved Domains (1) summary
      pfam00992
      Location:55 → 173
      Troponin

    4. XM_001688575.3 → XP_001688627.1  troponin I isoform X3

      See identical proteins and their annotated locations for XP_001688627.1

      UniProtKB/TrEMBL
      A7UTK5, Q3B717
      Conserved Domains (1) summary
      pfam00992
      Location:55 → 173
      Troponin

    5. XM_315309.6 → XP_315309.4  troponin I isoform X2

      See identical proteins and their annotated locations for XP_315309.4

      UniProtKB/TrEMBL
      B1Q289, Q7PI45
      Conserved Domains (1) summary
      pfam00992
      Location:55 → 173
      Troponin

    6. XM_003437142.2 → XP_003437190.1  troponin I isoform X2

      See identical proteins and their annotated locations for XP_003437190.1

      UniProtKB/TrEMBL
      B1Q289, Q7PI45
      Conserved Domains (1) summary
      pfam00992
      Location:55 → 173
      Troponin

    7. XM_003437146.2 → XP_003437194.1  troponin I isoform X6

      See identical proteins and their annotated locations for XP_003437194.1

      UniProtKB/TrEMBL
      F5HLW0
      Conserved Domains (1) summary
      pfam00992
      Location:55 → 173
      Troponin

    8. XM_003437145.2 → XP_003437193.1  troponin I isoform X5

      See identical proteins and their annotated locations for XP_003437193.1

      UniProtKB/TrEMBL
      F5HLW1
      Conserved Domains (1) summary
      pfam00992
      Location:55 → 173
      Troponin

    9. XM_061643437.1 → XP_061499421.1  troponin I isoform X5

      UniProtKB/TrEMBL
      F5HLW1

    10. XM_061643414.1 → XP_061499398.1  troponin I isoform X4

      UniProtKB/TrEMBL
      A7UTK6, Q3B716
    Nucleotide Protein Strain
    Heading Accession and Version

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