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    Mapk4 mitogen-activated protein kinase 4 [ Mus musculus (house mouse) ]

    Gene ID: 225724, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mapk4provided by MGI
    Official Full Name
    mitogen-activated protein kinase 4provided by MGI
    Primary source
    MGI:MGI:2444559
    See related
    Ensembl:ENSMUSG00000024558 AllianceGenome:MGI:2444559
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Erk3; Prkm4; p63Mapk; A330097D03Rik
    Summary
    Enables protein heterodimerization activity; protein homodimerization activity; and protein kinase binding activity. Predicted to be involved in intracellular signal transduction. Located in cytoplasm and nucleus. Is expressed in several structures, including brain; genitourinary system; nasal epithelium; stomach; and thymus. Orthologous to human MAPK4 (mitogen-activated protein kinase 4). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in frontal lobe adult (RPKM 8.4), cortex adult (RPKM 7.3) and 18 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Mapk4 in Genome Data Viewer
    Location:
    18 E2; 18 50.31 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (74061557..74198643, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (73928486..74065434, complement)

    Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_44997 Neighboring gene predicted gene, 52346 Neighboring gene predicted gene, 32661 Neighboring gene maestro Neighboring gene RIKEN cDNA D730045A05 gene Neighboring gene STARR-seq mESC enhancer starr_45000 Neighboring gene STARR-seq mESC enhancer starr_45001 Neighboring gene predicted gene 9925 Neighboring gene STARR-seq mESC enhancer starr_45002 Neighboring gene predicted gene, 32801 Neighboring gene predicted gene, 57658

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables JUN kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein heterodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein homodimerization activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein serine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in JNK cascade IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    mitogen-activated protein kinase 4
    Names
    ERK-4
    Erk3-related
    MAP kinase 4
    MAPK 4
    extracellular signal-regulated kinase 4
    NP_001347865.1
    NP_766220.2
    XP_006525963.1
    XP_006525964.1
    XP_030106306.1
    XP_030106307.1
    XP_030106308.1
    XP_036017016.1
    XP_036017017.1
    XP_036017018.1
    XP_036017019.1
    XP_036017020.1
    XP_036017021.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001360936.1NP_001347865.1  mitogen-activated protein kinase 4 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC124367
      Conserved Domains (1) summary
      cl21453
      Location:2172
      PKc_like; Protein Kinases, catalytic domain
    2. NM_172632.2NP_766220.2  mitogen-activated protein kinase 4 isoform 1

      See identical proteins and their annotated locations for NP_766220.2

      Status: VALIDATED

      Source sequence(s)
      BC058942, BC094564, CB526503
      Consensus CDS
      CCDS37856.1
      UniProtKB/Swiss-Prot
      Q6P5G0
      UniProtKB/TrEMBL
      Q8BV72
      Related
      ENSMUSP00000089462.4, ENSMUST00000091851.10
      Conserved Domains (1) summary
      cd07854
      Location:14351
      STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000084.7 Reference GRCm39 C57BL/6J

      Range
      74061557..74198643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006525901.5XP_006525964.1  mitogen-activated protein kinase 4 isoform X1

      See identical proteins and their annotated locations for XP_006525964.1

      UniProtKB/Swiss-Prot
      Q6P5G0
      UniProtKB/TrEMBL
      Q8BV72
      Conserved Domains (1) summary
      cd07854
      Location:14351
      STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
    2. XM_036161128.1XP_036017021.1  mitogen-activated protein kinase 4 isoform X3

      Conserved Domains (1) summary
      cl21453
      Location:1114
      PKc_like; Protein Kinases, catalytic domain
    3. XM_036161125.1XP_036017018.1  mitogen-activated protein kinase 4 isoform X3

      Conserved Domains (1) summary
      cl21453
      Location:1114
      PKc_like; Protein Kinases, catalytic domain
    4. XM_036161123.1XP_036017016.1  mitogen-activated protein kinase 4 isoform X1

      UniProtKB/Swiss-Prot
      Q6P5G0
      UniProtKB/TrEMBL
      Q8BV72
      Conserved Domains (1) summary
      cd07854
      Location:14351
      STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
    5. XM_030250447.2XP_030106307.1  mitogen-activated protein kinase 4 isoform X1

      UniProtKB/Swiss-Prot
      Q6P5G0
      UniProtKB/TrEMBL
      Q8BV72
      Conserved Domains (1) summary
      cd07854
      Location:14351
      STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
    6. XM_036161124.1XP_036017017.1  mitogen-activated protein kinase 4 isoform X1

      UniProtKB/Swiss-Prot
      Q6P5G0
      UniProtKB/TrEMBL
      Q8BV72
      Conserved Domains (1) summary
      cd07854
      Location:14351
      STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
    7. XM_030250448.1XP_030106308.1  mitogen-activated protein kinase 4 isoform X2

      Conserved Domains (1) summary
      cl21453
      Location:1140
      PKc_like; Protein Kinases, catalytic domain
    8. XM_006525900.4XP_006525963.1  mitogen-activated protein kinase 4 isoform X1

      See identical proteins and their annotated locations for XP_006525963.1

      UniProtKB/Swiss-Prot
      Q6P5G0
      UniProtKB/TrEMBL
      Q8BV72
      Conserved Domains (1) summary
      cd07854
      Location:14351
      STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
    9. XM_036161126.1XP_036017019.1  mitogen-activated protein kinase 4 isoform X3

      Conserved Domains (1) summary
      cl21453
      Location:1114
      PKc_like; Protein Kinases, catalytic domain
    10. XM_030250446.2XP_030106306.1  mitogen-activated protein kinase 4 isoform X1

      UniProtKB/Swiss-Prot
      Q6P5G0
      UniProtKB/TrEMBL
      Q8BV72
      Conserved Domains (1) summary
      cd07854
      Location:14351
      STKc_MAPK4_6; Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 (also called ERK4) and 6 (also called ERK3)
    11. XM_036161127.1XP_036017020.1  mitogen-activated protein kinase 4 isoform X3

      Conserved Domains (1) summary
      cl21453
      Location:1114
      PKc_like; Protein Kinases, catalytic domain