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    SAP30BP SAP30 binding protein [ Gallus gallus (chicken) ]

    Gene ID: 417375, updated on 17-Aug-2024

    Summary

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    Symbol
    SAP30BPprovided by CGNC
    Full Name
    SAP30 binding proteinprovided by CGNC
    Primary source
    CGNC:1720
    See related
    Ensembl:ENSGALG00010029812
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SAP30BP in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (5367819..5402476, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (4971480..5005868, complement)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC417372 Neighboring gene H3.3 variant histone B Neighboring gene galactokinase 1 Neighboring gene integrin subunit beta 4 Neighboring gene RecQ like helicase 5 Neighboring gene small integral membrane protein 5 Neighboring gene myosin-XV-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SAP30-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5367819..5402476 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_415631.8 → XP_415631.4  SAP30-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1AFG1
      Related
      ENSGALP00010044761.1, ENSGALT00010072125.1

    2. XM_004946141.5 → XP_004946198.3  SAP30-binding protein isoform X2

      UniProtKB/TrEMBL
      A0A8V1AQ76
      Related
      ENSGALP00010044762.1, ENSGALT00010072127.1

    RNA

    1. XR_006931748.1 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4971480..5005868 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040686281.2 → XP_040542215.1  SAP30-binding protein isoform X4

    2. XM_040686280.2 → XP_040542214.2  SAP30-binding protein isoform X3

    RNA

    1. XR_006936561.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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