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    ANKRD52 ankyrin repeat domain 52 [ Gallus gallus (chicken) ]

    Gene ID: 426469, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ANKRD52provided by CGNC
    Official Full Name
    ankyrin repeat domain 52provided by CGNC
    Primary source
    CGNC:52797
    See related
    Ensembl:ENSGALG00010024919
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ANKRD52 in Genome Data Viewer
    Location:
    chromosome: 34
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 34 NC_052565.1 (1450901..1470960, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 34 NC_052606.1 (1466120..1486181)

    Chromosome 34 - NC_052565.1Genomic Context describing neighboring genes Neighboring gene nucleic acid binding protein 2 Neighboring gene solute carrier family 39 member 5 Neighboring gene coenzyme Q10A Neighboring gene citrate synthase Neighboring gene canopy FGF signaling regulator 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein localization to ciliary inversin compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary inversin compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
    Names
    PP6-ARS-C
    serine/threonine-protein phosphatase 6 regulatory subunit ARS-C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012939.2 → NP_001012957.2  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000490
      Related
      ENSGALP00010037634.1, ENSGALT00010060877.1
      Conserved Domains (5) summary
      PHA02874
      Location:588 → 897
      PHA02874; ankyrin repeat protein; Provisional
      PHA03095
      Location:18 → 317
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:76 → 104
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:861 → 954
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:952 → 996
      Ank_5; Ankyrin repeats (many copies)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052565.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1450901..1470960 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046904959.1 → XP_046760915.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2

    2. XM_040654755.2 → XP_040510689.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1

      Conserved Domains (5) summary
      PHA02874
      Location:603 → 912
      PHA02874; ankyrin repeat protein; Provisional
      PHA02876
      Location:79 → 432
      PHA02876; ankyrin repeat protein; Provisional
      PHA03095
      Location:306 → 674
      PHA03095; ankyrin-like protein; Provisional
      COG0666
      Location:837 → 1022
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:91 → 119
      ANK; ANK repeat [structural motif]

    3. XM_040654754.2 → XP_040510688.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X3

      UniProtKB/TrEMBL
      A0A8V1A0V2
      Related
      ENSGALP00010037630.1, ENSGALT00010060873.1
      Conserved Domains (4) summary
      PHA02874
      Location:659 → 968
      PHA02874; ankyrin repeat protein; Provisional
      PHA03095
      Location:89 → 388
      PHA03095; ankyrin-like protein; Provisional
      COG0666
      Location:893 → 1078
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:147 → 175
      ANK; ANK repeat [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052606.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1466120..1486181
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934214.1 → XP_046790170.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X4

    2. XM_046934216.1 → XP_046790172.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2

    3. XM_046934215.1 → XP_046790171.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZLC8.1 GenPept UniProtKB/Swiss-Prot:Q5ZLC8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials