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    CENPU centromere protein U [ Gallus gallus (chicken) ]

    Gene ID: 422548, updated on 3-Dec-2024

    Summary

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    Symbol
    CENPUprovided by CGNC
    Full Name
    centromere protein Uprovided by CGNC
    Primary source
    CGNC:14122
    See related
    Ensembl:ENSGALG00010007038
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    MLF1IP; CENP-50
    Orthologs
    human mouse all
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    Genomic context

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    See CENPU in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (39046186..39056616)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (38993815..39004246)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107051755 Neighboring gene uncharacterized LOC121110733 Neighboring gene acyl-CoA synthetase long-chain family member 1 Neighboring gene helt bHLH transcription factor Neighboring gene primase and DNA directed polymerase Neighboring gene caspase 3 Neighboring gene uncharacterized LOC121110735 Neighboring gene interferon regulatory factor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The constitutive centromere component CENP-50 is required for recovery from spindle damage. Minoshima Y, et al. Mol Cell Biol, 2005 Dec. PMID 16287847, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centromere protein U
    Names
    CENP-U
    KSHV latent nuclear antigen interacting protein 1
    MLF1-interacting protein
    centromere protein of 50 kDa
    centromere protein p50

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039299.2 → NP_001034388.2  centromere protein U

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000073
      UniProtKB/Swiss-Prot
      Q2Z1W2
      UniProtKB/TrEMBL
      A0A8V0XZK8
      Related
      ENSGALP00010009427.1, ENSGALT00010016715.1
      Conserved Domains (1) summary
      TIGR02169
      Location:205 → 272
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      39046186..39056616
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015276229.4 → XP_015131715.2  centromere protein U isoform X1

      UniProtKB/Swiss-Prot
      Q2Z1W2
      Conserved Domains (1) summary
      TIGR02169
      Location:196 → 263
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      38993815..39004246
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046916039.1 → XP_046771995.1  centromere protein U isoform X1

      UniProtKB/Swiss-Prot
      Q2Z1W2
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2Z1W2.1 GenPept UniProtKB/Swiss-Prot:Q2Z1W2

    Gene LinkOut

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