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    DPH3P1 diphthamide biosynthesis 3 pseudogene 1 [ Gallus gallus (chicken) ]

    Gene ID: 420643, updated on 17-Aug-2024

    Summary

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    Symbol
    DPH3P1provided by CGNC
    Full Name
    diphthamide biosynthesis 3 pseudogene 1provided by CGNC
    Primary source
    CGNC:8537
    See related
    Ensembl:ENSGALG00010002206
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    DPH3
    Orthologs
    human mouse all
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    Genomic context

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    See DPH3P1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (34198666..34201490, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (34248347..34251183, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 28 Neighboring gene uncharacterized LOC101751380 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 15 Neighboring gene oxidoreductase NAD binding domain containing 1 Neighboring gene raftlin, lipid raft linker 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein histidyl modification to diphthamide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    diphthamide biosynthesis protein 3
    Names
    DPH3, KTI11 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001302106.2 → NP_001289035.1  diphthamide biosynthesis protein 3

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000037
      UniProtKB/TrEMBL
      A0A8V0X4S0
      Related
      ENSGALP00010002961.1, ENSGALT00010004959.1
      Conserved Domains (1) summary
      cl21704
      Location:4 → 66
      zf-CSL; CSL zinc finger

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      34198666..34201490 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      34248347..34251183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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