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    RNF145 ring finger protein 145 [ Gallus gallus (chicken) ]

    Gene ID: 416239, updated on 3-Dec-2024

    Summary

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    Symbol
    RNF145provided by CGNC
    Full Name
    ring finger protein 145provided by CGNC
    Primary source
    CGNC:2700
    See related
    Ensembl:ENSGALG00010014931
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RNF145 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (10235005..10275524)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (10237511..10278041)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene serine protease inhibitor Kazal-type 6-like Neighboring gene ubiquitin like domain containing CTD phosphatase 1 Neighboring gene EBF transcription factor 1 Neighboring gene uncharacterized LOC101749832 Neighboring gene clathrin interactor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger protein 145
    XP_001233173.1
    XP_015149382.1
    XP_040538577.1
    XP_040538578.1
    XP_046756393.1
    XP_046756394.1
    XP_046756395.1
    XP_046783067.1
    XP_046783068.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10235005..10275524
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001233172.7 → XP_001233173.1  RING finger protein 145 isoform X1

      See identical proteins and their annotated locations for XP_001233173.1

      UniProtKB/TrEMBL
      A0A8V0YQB0, E1C258
      Related
      ENSGALP00010020848.1, ENSGALT00010035927.1
      Conserved Domains (3) summary
      pfam12678
      Location:518 → 575
      zf-rbx1; RING-H2 zinc finger
      pfam13639
      Location:535 → 575
      zf-RING_2; Ring finger domain
      pfam13705
      Location:8 → 506
      TRC8_N; TRC8 N-terminal domain

    2. XM_046900439.1 → XP_046756395.1  RING finger protein 145 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YS05
      Related
      ENSGALP00010020839.1, ENSGALT00010035915.1

    3. XM_015293896.4 → XP_015149382.1  RING finger protein 145 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YQB0, E1C258
      Related
      ENSGALP00010020850.1, ENSGALT00010035931.1
      Conserved Domains (3) summary
      pfam12678
      Location:518 → 575
      zf-rbx1; RING-H2 zinc finger
      pfam13639
      Location:535 → 575
      zf-RING_2; Ring finger domain
      pfam13705
      Location:8 → 506
      TRC8_N; TRC8 N-terminal domain

    4. XM_046900437.1 → XP_046756393.1  RING finger protein 145 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YQB0, E1C258

    5. XM_046900438.1 → XP_046756394.1  RING finger protein 145 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YQB0, E1C258

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      10237511..10278041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040682643.2 → XP_040538577.1  RING finger protein 145 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YQB0
      Conserved Domains (2) summary
      COG5243
      Location:520 → 647
      HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
      cd16684
      Location:533 → 575
      RING-H2_RNF145; RING finger, H2 subclass, found in RING finger protein 145 (RNF145) and similar proteins

    2. XM_046927112.1 → XP_046783068.1  RING finger protein 145 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YS05

    3. XM_040682644.2 → XP_040538578.1  RING finger protein 145 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YQB0
      Conserved Domains (2) summary
      COG5243
      Location:520 → 647
      HRD1; HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
      cd16684
      Location:533 → 575
      RING-H2_RNF145; RING finger, H2 subclass, found in RING finger protein 145 (RNF145) and similar proteins

    4. XM_046927111.1 → XP_046783067.1  RING finger protein 145 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YQB0

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001030614.1: Suppressed sequence

      Description
      NM_001030614.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
    Nucleotide Protein Strain
    Heading Accession and Version

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