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    SKP1 S-phase kinase-associated protein 1 [ Gallus gallus (chicken) ]

    Gene ID: 416319, updated on 3-Dec-2024

    Summary

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    Symbol
    SKP1provided by CGNC
    Full Name
    S-phase kinase-associated protein 1provided by CGNC
    Primary source
    CGNC:4880
    See related
    Ensembl:ENSGALG00010015876
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SKP1A; CTD-2410N18.5
    Orthologs
    human mouse all
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    Genomic context

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    See SKP1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (15511258..15520295)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (15523066..15532105)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112533436 Neighboring gene ubiquitin conjugating enzyme E2 B Neighboring gene uncharacterized LOC107054556 Neighboring gene protein phosphatase 2 catalytic subunit alpha Neighboring gene transcription factor 7 (T-cell specific, HMG-box) Neighboring gene uncharacterized LOC124417180 Neighboring gene voltage dependent anion channel 1 Neighboring gene uncharacterized LOC121106749

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteomic studies of Syk-interacting proteins using a novel amine-specific isotope tag and GFP nanotrap. Galan JA, et al. J Am Soc Mass Spectrom, 2011 Feb. PMID 21472591, Free PMC Article
    2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cullin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    S-phase kinase-associated protein 1
    Names
    S-phase kinase-associated protein 1A
    cyclin-A/CDK2-associated protein p19
    p19A
    p19skp1
    NP_001006153.1
    XP_025010624.1
    XP_040502854.1
    XP_040502855.1
    XP_046782961.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006153.2 → NP_001006153.1  S-phase kinase-associated protein 1

      See identical proteins and their annotated locations for NP_001006153.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000256
      UniProtKB/Swiss-Prot
      Q5ZKF5
      UniProtKB/TrEMBL
      A0A8V0Z0E3
      Related
      ENSGALP00010022103.1, ENSGALT00010038282.1
      Conserved Domains (2) summary
      cd18322
      Location:4 → 127
      BTB_POZ_SKP1; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-associated protein 1 (SKP1) and similar proteins
      pfam01466
      Location:113 → 160
      Skp1; Skp1 family, dimerization domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      15511258..15520295
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040646920.2 → XP_040502854.1  S-phase kinase-associated protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q5ZKF5
      UniProtKB/TrEMBL
      A0A8V0Z0E3
      Conserved Domains (2) summary
      cd18322
      Location:4 → 127
      BTB_POZ_SKP1; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-associated protein 1 (SKP1) and similar proteins
      pfam01466
      Location:113 → 160
      Skp1; Skp1 family, dimerization domain

    2. XM_025154856.3 → XP_025010624.1  S-phase kinase-associated protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q5ZKF5
      UniProtKB/TrEMBL
      A0A8V0Z0E3
      Conserved Domains (2) summary
      cd18322
      Location:4 → 127
      BTB_POZ_SKP1; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-associated protein 1 (SKP1) and similar proteins
      pfam01466
      Location:113 → 160
      Skp1; Skp1 family, dimerization domain

    3. XM_040646921.2 → XP_040502855.1  S-phase kinase-associated protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q5ZKF5
      UniProtKB/TrEMBL
      A0A8V0Z0E3
      Related
      ENSGALP00010022099.1, ENSGALT00010038277.1
      Conserved Domains (2) summary
      cd18322
      Location:4 → 127
      BTB_POZ_SKP1; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in S-phase kinase-associated protein 1 (SKP1) and similar proteins
      pfam01466
      Location:113 → 160
      Skp1; Skp1 family, dimerization domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      15523066..15532105
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046927005.1 → XP_046782961.1  S-phase kinase-associated protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q5ZKF5
      UniProtKB/TrEMBL
      A0A8V0Z0E3
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZKF5.1 GenPept UniProtKB/Swiss-Prot:Q5ZKF5

    Gene LinkOut

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