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    OGN osteoglycin [ Gallus gallus (chicken) ]

    Gene ID: 374039, updated on 17-Aug-2024

    Summary

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    Symbol
    OGNprovided by CGNC
    Full Name
    osteoglycinprovided by CGNC
    Primary source
    CGNC:66182
    See related
    Ensembl:ENSGALG00010027205
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See OGN in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (3616876..3628603)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (3639420..3651147)

    Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene centromere protein P Neighboring gene biglycan Neighboring gene osteomodulin Neighboring gene nucleolar protein 8 Neighboring gene uncharacterized LOC121106646 Neighboring gene coiled-coil domain-containing glutamate-rich protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression of the keratan sulfate proteoglycans lumican, keratocan and osteoglycin/mimecan during chick corneal development. Dunlevy JR, et al. Exp Eye Res, 2000 Mar. PMID 10712821
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mimecan
    Names
    osteoglycin (osteoinductive factor)
    osteoglycin (osteoinductive factor, mimecan)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_204209.2 → NP_989540.1  mimecan precursor

      See identical proteins and their annotated locations for NP_989540.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000252
      UniProtKB/Swiss-Prot
      Q9W6H0
      Related
      ENSGALP00010040218.1, ENSGALT00010065952.1
      Conserved Domains (4) summary
      PRK15370
      Location:70 → 242
      PRK15370; type III secretion system effector E3 ubiquitin transferase SlrP
      sd00031
      Location:119 → 140
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:165 → 180
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:183 → 242
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3616876..3628603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3639420..3651147
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9W6H0.1 GenPept UniProtKB/Swiss-Prot:Q9W6H0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.