CAPRIN1 cell cycle associated protein 1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: CAPRIN1provided by CGNC
Full Name: cell cycle associated protein 1provided by CGNC
Primary source: CGNC:10161
See related: Ensembl:ENSGALG00010024855
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: M11S1; GPIAP1; caprin-1
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 5

Exon count:: 19

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	5	NC_052536.1 (18010301..18045015)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	5	NC_052577.1 (17970654..18005355)

Chromosome 5 - NC_052536.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Clones of caprin-1-null DT40 cells exhibit marked reductions in their proliferation rate.
Title: Absence of caprin-1 results in defects in cellular proliferation.

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: caprin-1

Names: GPI-anchored membrane protein 1; cytoplasmic activation- proliferation-associated protein 1; membrane component, chromosome 11, surface marker 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001031365.2 → NP_001026536.1 caprin-1 isoform 1

See identical proteins and their annotated locations for NP_001026536.1

Status: VALIDATED

Source sequence(s)

JAENSK010000214

UniProtKB/TrEMBL

Q5XNV3

Related

ENSGALP00010037443.1, ENSGALT00010060684.1

Conserved Domains (1) summary

pfam12287
Location:360 → 672

Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
NM_001398432.1 → NP_001385361.1 caprin-1 isoform 2

Status: VALIDATED

Source sequence(s)

JAENSK010000214

UniProtKB/TrEMBL

A0A8V1A4Q9

Related

ENSGALP00010037440.1, ENSGALT00010060681.1

Conserved Domains (3) summary

COG0419
Location:45 → 185

SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]

pfam12287
Location:323 → 645

Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term

pfam18293
Location:125 → 240

Caprin-1_dimer; Caprin-1 dimerization domain