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    C1QTNF3 C1q and TNF related 3 [ Gallus gallus (chicken) ]

    Gene ID: 427430, updated on 17-Aug-2024

    Summary

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    Official Symbol
    C1QTNF3provided by CGNC
    Official Full Name
    C1q and TNF related 3provided by CGNC
    Primary source
    CGNC:66529
    See related
    Ensembl:ENSGALG00010013207
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See C1QTNF3 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (10926533..10943111, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (10926533..10943111, complement)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 45 member 2 Neighboring gene uncharacterized LOC107051929 Neighboring gene alpha-methylacyl-CoA racemase Neighboring gene uncharacterized LOC107051930 Neighboring gene retinoic acid induced 14

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    complement C1q tumor necrosis factor-related protein 3
    Names
    C1q and tumor necrosis factor related protein 3
    XP_004937232.1
    XP_046761755.1
    XP_046791378.1
    XP_046791379.1
    XP_046791380.1
    XP_425002.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10926533..10943111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004937175.5 → XP_004937232.1  complement C1q tumor necrosis factor-related protein 3 isoform X2

      UniProtKB/TrEMBL
      R4GKL8
      Conserved Domains (2) summary
      pfam01391
      Location:71 → 113
      Collagen; Collagen triple helix repeat (20 copies)
      pfam00386
      Location:119 → 242
      C1q; C1q domain

    2. XM_425002.8 → XP_425002.3  complement C1q tumor necrosis factor-related protein 3 isoform X1

      UniProtKB/TrEMBL
      R4GKL8
      Related
      ENSGALP00010018548.1, ENSGALT00010031700.1
      Conserved Domains (2) summary
      pfam01391
      Location:139 → 181
      Collagen; Collagen triple helix repeat (20 copies)
      pfam00386
      Location:187 → 310
      C1q; C1q domain

    3. XM_046905799.1 → XP_046761755.1  complement C1q tumor necrosis factor-related protein 3 isoform X3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      10926533..10943111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046935423.1 → XP_046791379.1  complement C1q tumor necrosis factor-related protein 3 isoform X2

    2. XM_046935422.1 → XP_046791378.1  complement C1q tumor necrosis factor-related protein 3 isoform X1

      UniProtKB/TrEMBL
      R4GKL8

    3. XM_046935424.1 → XP_046791380.1  complement C1q tumor necrosis factor-related protein 3 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

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