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    MDN1 midasin AAA ATPase 1 [ Gallus gallus (chicken) ]

    Gene ID: 421811, updated on 17-Aug-2024

    Summary

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    Symbol
    MDN1provided by CGNC
    Full Name
    midasin AAA ATPase 1provided by CGNC
    Primary source
    CGNC:11734
    See related
    Ensembl:ENSGALG00010003308
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See MDN1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    102
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (75133879..75227834)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (74931531..75025978)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110251 Neighboring gene BTB domain and CNC homolog 2 Neighboring gene caspase 8 associated protein 2 Neighboring gene gap junction protein, alpha 10, 62kDa Neighboring gene ankyrin repeat domain 6 Neighboring gene LYR motif containing 2 Neighboring gene microRNA 1686

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal large subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of preribosome, large subunit precursor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    midasin
    Names
    MDN1, midasin homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      75133879..75227834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_419835.8 → XP_419835.4  midasin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XG49
      Related
      ENSGALP00010004659.1, ENSGALT00010007753.1

    2. XM_004940386.5 → XP_004940443.1  midasin isoform X2

      UniProtKB/TrEMBL
      A0A8V0XG49
      Conserved Domains (6) summary
      cd00009
      Location:649 → 769
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      smart00382
      Location:1373 → 1530
      AAA; ATPases associated with a variety of cellular activities
      COG0714
      Location:1728 → 1896
      MoxR; MoxR-like ATPase [General function prediction only]
      cd01460
      Location:5301 → 5571
      vWA_midasin; VWA_Midasin: Midasin is a member of the AAA ATPase family. The proteins of this family are unified by their common archetectural organization that is based upon a conserved ATPase domain. The AAA domain of midasin contains six tandem AAA protomers. The ...
      pfam07728
      Location:1375 → 1530
      AAA_5; AAA domain (dynein-related subfamily)
      cl21455
      Location:1069 → 1205
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    RNA

    1. XR_005858499.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      74931531..75025978
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040667143.2 → XP_040523077.1  midasin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XG49
      Conserved Domains (1) summary
      COG5271
      Location:206 → 2307
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

    2. XM_040667144.2 → XP_040523078.1  midasin isoform X2

      UniProtKB/TrEMBL
      A0A8V0XG49
      Conserved Domains (1) summary
      COG5271
      Location:206 → 2307
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

    RNA

    1. XR_005848151.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Research Materials