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    PELI3 pellino E3 ubiquitin protein ligase family member 3 [ Gallus gallus (chicken) ]

    Gene ID: 421279, updated on 3-Dec-2024

    Summary

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    Symbol
    PELI3provided by CGNC
    Full Name
    pellino E3 ubiquitin protein ligase family member 3provided by CGNC
    Primary source
    CGNC:51458
    See related
    Ensembl:ENSGALG00010018958
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    PELI1
    Orthologs
    human mouse all
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    Genomic context

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    See PELI3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (9821955..9864199, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (9767019..9809215, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene UDP-glucose pyrophosphorylase 2 Neighboring gene VPS54 subunit of GARP complex Neighboring gene uncharacterized LOC121110490 Neighboring gene uncharacterized LOC769512

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K48-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Toll signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase pellino homolog 1
    Names
    pellino E3 ubiquitin protein ligase 1
    pellino homolog 1
    pellino protein
    protein pellino homolog 1
    NP_001012890.1
    XP_015133533.1
    XP_015133534.1
    XP_015133535.1
    XP_025004410.1
    XP_046769530.1
    XP_046769531.1
    XP_046769532.1
    XP_046769533.1
    XP_046769534.1
    XP_046769535.1
    XP_046769536.1
    XP_046794654.1
    XP_046794655.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012872.2 → NP_001012890.1  E3 ubiquitin-protein ligase pellino homolog 1

      See identical proteins and their annotated locations for NP_001012890.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ719997
      UniProtKB/TrEMBL
      A0A8V0Z8Q5, Q5ZKT7
      Conserved Domains (1) summary
      pfam04710
      Location:10 → 405
      Pellino; Pellino

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9821955..9864199 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025148642.3 → XP_025004410.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z8Q5
      Related
      ENSGALP00010027349.1, ENSGALT00010045903.1
      Conserved Domains (1) summary
      pfam04710
      Location:10 → 418
      Pellino

    2. XM_015278049.3 → XP_015133535.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z8Q5
      Conserved Domains (1) summary
      pfam04710
      Location:10 → 429
      Pellino; Pellino

    3. XM_015278048.4 → XP_015133534.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z864, A0A8V0ZFJ8
      Related
      ENSGALP00010027352.1, ENSGALT00010045908.1
      Conserved Domains (1) summary
      pfam04710
      Location:53 → 461
      Pellino

    4. XM_015278047.4 → XP_015133533.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZFJ8
      Conserved Domains (1) summary
      pfam04710
      Location:53 → 472
      Pellino; Pellino

    5. XM_046938699.1 → XP_046794655.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z8Q5

    6. XM_046938698.1 → XP_046794654.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z8Q5

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9767019..9809215 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046913580.1 → XP_046769536.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0Z8Q5

    2. XM_046913576.1 → XP_046769532.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z8Q5

    3. XM_046913575.1 → XP_046769531.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z864, A0A8V0ZFJ8

    4. XM_046913574.1 → XP_046769530.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZFJ8

    5. XM_046913579.1 → XP_046769535.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z8Q5

    6. XM_046913578.1 → XP_046769534.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z8Q5

    7. XM_046913577.1 → XP_046769533.1  E3 ubiquitin-protein ligase pellino homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z8Q5
    Nucleotide Protein Strain
    Heading Accession and Version

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