U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TBCD tubulin folding cofactor D [ Gallus gallus (chicken) ]

    Gene ID: 417334, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Symbol
    TBCDprovided by CGNC
    Full Name
    tubulin folding cofactor Dprovided by CGNC
    Primary source
    CGNC:1039
    See related
    Ensembl:ENSGALG00010029421
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TBCD in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (3857945..3967169, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (3462211..3571499, complement)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054735 Neighboring gene meteorin, glial cell differentiation regulator-like Neighboring gene uncharacterized LOC107054736 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 Neighboring gene zinc finger protein 750 Neighboring gene fructosamine 3 kinase Neighboring gene fructosamine 3 kinase related protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables beta-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adherens junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in bicellular tight junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in post-chaperonin tubulin folding pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tubulin complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tubulin-specific chaperone D
    Names
    beta-tubulin cofactor D

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001389246.2 → NP_001376175.2  tubulin-specific chaperone D

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000316
      UniProtKB/TrEMBL
      A0A8V1AI94
      Related
      ENSGALP00010043864.1, ENSGALT00010071173.1
      Conserved Domains (1) summary
      cl19887
      Location:62 → 1067
      TFCD_C; Tubulin folding cofactor D C terminal

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3857945..3967169 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015295136.4 → XP_015150622.2  tubulin-specific chaperone D isoform X1

      UniProtKB/TrEMBL
      A0A8V1AI94, A0A8V1AM59
      Related
      ENSGALP00010043867.1, ENSGALT00010071176.1
      Conserved Domains (1) summary
      cl19887
      Location:62 → 1067
      TFCD_C; Tubulin folding cofactor D C terminal

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      3462211..3571499 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046929328.1 → XP_046785284.1  tubulin-specific chaperone D isoform X1

      UniProtKB/TrEMBL
      A0A8V1AI94, A0A8V1AM59

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001012801.1: Suppressed sequence

      Description
      NM_001012801.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZI87.1 GenPept UniProtKB/Swiss-Prot:Q5ZI87

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials