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    PHLDB2 pleckstrin homology like domain family B member 2 [ Gallus gallus (chicken) ]

    Gene ID: 418418, updated on 3-Dec-2024

    Summary

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    Symbol
    PHLDB2provided by CGNC
    Full Name
    pleckstrin homology like domain family B member 2provided by CGNC
    Primary source
    CGNC:50761
    See related
    Ensembl:ENSGALG00010005114
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PHLDB2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (88648980..88762161)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (88699911..88812914)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107055009 Neighboring gene phosphatidylinositol specific phospholipase C X domain containing 2 Neighboring gene uncharacterized LOC121110249 Neighboring gene microRNA 7446 Neighboring gene abhydrolase domain containing 10 Neighboring gene uncharacterized LOC124417252 Neighboring gene transgelin 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in basal cortex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pleckstrin homology-like domain family B member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      88648980..88762161
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040667005.2 → XP_040522939.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:589 → 826
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1221 → 1325
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam17380
      Location:1116 → 1184
      DUF5401; Family of unknown function (DUF5401)

    2. XM_040667026.2 → XP_040522960.1  pleckstrin homology-like domain family B member 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XJ50, A0A8V0XRJ8
      Related
      ENSGALP00010006713.1, ENSGALT00010012026.1
      Conserved Domains (3) summary
      COG1196
      Location:589 → 793
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1178 → 1282
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam17380
      Location:1073 → 1141
      DUF5401; Family of unknown function (DUF5401)

    3. XM_046901523.1 → XP_046757479.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50

    4. XM_040667011.2 → XP_040522945.1  pleckstrin homology-like domain family B member 2 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:588 → 825
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1220 → 1324
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam02463
      Location:604 → 1183
      SMC_N; RecF/RecN/SMC N terminal domain

    5. XM_040667009.2 → XP_040522943.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:589 → 826
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1221 → 1325
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam17380
      Location:1116 → 1184
      DUF5401; Family of unknown function (DUF5401)

    6. XM_046901545.1 → XP_046757501.1  pleckstrin homology-like domain family B member 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XJ50

    7. XM_046901535.1 → XP_046757491.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50

    8. XM_040667000.2 → XP_040522934.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:589 → 826
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1221 → 1325
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam17380
      Location:1116 → 1184
      DUF5401; Family of unknown function (DUF5401)

    9. XM_040666989.2 → XP_040522923.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:589 → 826
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1221 → 1325
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam17380
      Location:1116 → 1184
      DUF5401; Family of unknown function (DUF5401)

    10. XM_046901541.1 → XP_046757497.1  pleckstrin homology-like domain family B member 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XJ50

    11. XM_046901527.1 → XP_046757483.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50

    12. XM_046901517.1 → XP_046757473.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50

    13. XM_046901562.1 → XP_046757518.1  pleckstrin homology-like domain family B member 2 isoform X6

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Related
      ENSGALP00010006721.1, ENSGALT00010012045.1

    14. XM_046901567.1 → XP_046757523.1  pleckstrin homology-like domain family B member 2 isoform X8

      UniProtKB/TrEMBL
      A0A8V0XJ50, E1C7W8
      Related
      ENSGALP00010006724.1, ENSGALT00010012052.1

    15. XM_046901563.1 → XP_046757519.1  pleckstrin homology-like domain family B member 2 isoform X7

      UniProtKB/TrEMBL
      A0A3Q3AYE3, A0A8V0XJ50
      Related
      ENSGALP00010006718.1, ENSGALT00010012034.1

    16. XM_046901569.1 → XP_046757525.1  pleckstrin homology-like domain family B member 2 isoform X9

      UniProtKB/TrEMBL
      A0A8V0XJ50

    17. XM_040667019.2 → XP_040522953.1  pleckstrin homology-like domain family B member 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XJ50, A0A8V0XPF2
      Related
      ENSGALP00010006715.1, ENSGALT00010012029.1
      Conserved Domains (3) summary
      COG1196
      Location:577 → 814
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1209 → 1313
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam02463
      Location:593 → 1172
      SMC_N; RecF/RecN/SMC N terminal domain

    18. XM_046901576.1 → XP_046757532.1  pleckstrin homology-like domain family B member 2 isoform X11

    19. XM_046901578.1 → XP_046757534.1  pleckstrin homology-like domain family B member 2 isoform X11

    20. XM_046901572.1 → XP_046757528.1  pleckstrin homology-like domain family B member 2 isoform X10

    21. XM_046901581.1 → XP_046757537.1  pleckstrin homology-like domain family B member 2 isoform X11

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      88699911..88812914
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040662066.2 → XP_040518000.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:590 → 827
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1222 → 1326
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam02463
      Location:606 → 1185
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_040662071.2 → XP_040518005.1  pleckstrin homology-like domain family B member 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:590 → 794
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1179 → 1283
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam17380
      Location:1074 → 1142
      DUF5401; Family of unknown function (DUF5401)

    3. XM_046909050.1 → XP_046765006.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50

    4. XM_040662068.2 → XP_040518002.2  pleckstrin homology-like domain family B member 2 isoform X12

      UniProtKB/TrEMBL
      A0A8V0XJ50

    5. XM_046909054.1 → XP_046765010.1  pleckstrin homology-like domain family B member 2 isoform X14

      UniProtKB/TrEMBL
      A0A8V0XJ50

    6. XM_046909056.1 → XP_046765012.1  pleckstrin homology-like domain family B member 2 isoform X16

      UniProtKB/TrEMBL
      A0A8V0XF15

    7. XM_046909053.1 → XP_046765009.1  pleckstrin homology-like domain family B member 2 isoform X13

      UniProtKB/TrEMBL
      A0A8V0XJ50

    8. XM_046909055.1 → XP_046765011.1  pleckstrin homology-like domain family B member 2 isoform X15

      UniProtKB/TrEMBL
      A0A8V0XJ50

    9. XM_046909057.1 → XP_046765013.1  pleckstrin homology-like domain family B member 2 isoform X17

      UniProtKB/TrEMBL
      A0A8V0XF15

    10. XM_040662065.2 → XP_040517999.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:590 → 827
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1222 → 1326
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam02463
      Location:606 → 1185
      SMC_N; RecF/RecN/SMC N terminal domain

    11. XM_046909051.1 → XP_046765007.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50

    12. XM_040662064.2 → XP_040517998.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:590 → 827
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1222 → 1326
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam02463
      Location:606 → 1185
      SMC_N; RecF/RecN/SMC N terminal domain

    13. XM_046909052.1 → XP_046765008.1  pleckstrin homology-like domain family B member 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XJ50

    14. XM_046909049.1 → XP_046765005.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50

    15. XM_046909048.1 → XP_046765004.1  pleckstrin homology-like domain family B member 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XJ50

    16. XM_040662069.2 → XP_040518003.1  pleckstrin homology-like domain family B member 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XJ50
      Conserved Domains (3) summary
      COG1196
      Location:578 → 815
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd14673
      Location:1210 → 1314
      PH_PHLDB1_2; Pleckstrin homology-like domain-containing family B member 2 pleckstrin homology (PH) domain
      pfam02463
      Location:594 → 1173
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein Strain
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