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    PARL presenilin associated rhomboid like [ Gallus gallus (chicken) ]

    Gene ID: 424767, updated on 17-Aug-2024

    Summary

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    Symbol
    PARLprovided by CGNC
    Full Name
    presenilin associated rhomboid likeprovided by CGNC
    Primary source
    CGNC:1651
    See related
    Ensembl:ENSGALG00010024356
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    PSARL
    Orthologs
    human mouse all
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    Genomic context

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    See PARL in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (2281024..2292431, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (2150084..2161565, complement)

    Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene YEATS domain containing 2 Neighboring gene MAP6 domain containing 1 Neighboring gene coiled-coil domain-containing protein 81-like Neighboring gene claudin 15 Neighboring gene dual specificity phosphatase 28 Neighboring gene glypican 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    presenilins-associated rhomboid-like protein, mitochondrial
    XP_015132654.1
    XP_040535176.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2281024..2292431 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015277168.4 → XP_015132654.1  presenilins-associated rhomboid-like protein, mitochondrial

      UniProtKB/TrEMBL
      F1NUI6
      Related
      ENSGALP00010036275.1, ENSGALT00010059410.1
      Conserved Domains (1) summary
      pfam01694
      Location:184 → 325
      Rhomboid; Rhomboid family

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2150084..2161565 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040679242.2 → XP_040535176.1  presenilins-associated rhomboid-like protein, mitochondrial

      Conserved Domains (1) summary
      COG0705
      Location:187 → 334
      GlpG; Membrane associated serine protease, rhomboid family [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein Strain
    Heading Accession and Version

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