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    CEP290 centrosomal protein 290 [ Gallus gallus (chicken) ]

    Gene ID: 417887, updated on 17-Aug-2024

    Summary

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    Symbol
    CEP290provided by CGNC
    Full Name
    centrosomal protein 290provided by CGNC
    Primary source
    CGNC:8490
    See related
    Ensembl:ENSGALG00010011407
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CEP290 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    56
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (42856289..42906945, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (43198225..43248977, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107052879 Neighboring gene C12orf50 homolog Neighboring gene C12orf29 homolog Neighboring gene transmembrane and tetratricopeptide repeat containing 3 Neighboring gene KIT ligand Neighboring gene uncharacterized LOC112533343

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in camera-type eye development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in kidney development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centrosomal protein of 290 kDa; LOW QUALITY PROTEIN: centrosomal protein of 290 kDa
    Names
    centrosomal protein 290kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      42856289..42906945 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671177.2 → XP_040527111.1  centrosomal protein of 290 kDa isoform X2

      UniProtKB/TrEMBL
      A0A8V0YD03
      Conserved Domains (2) summary
      COG1196
      Location:100 → 465
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1275 → 1991
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. XM_040671180.2 → XP_040527114.1  centrosomal protein of 290 kDa isoform X2

      UniProtKB/TrEMBL
      A0A8V0YD03
      Conserved Domains (2) summary
      COG1196
      Location:100 → 465
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1275 → 1991
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. XM_004937603.5 → XP_004937660.2  centrosomal protein of 290 kDa isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y986, A0A8V0YD03
      Related
      ENSGALP00010015535.1, ENSGALT00010027281.1
      Conserved Domains (2) summary
      COG1196
      Location:1722 → 2453
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1275 → 1991
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    4. XM_040671196.2 → XP_040527130.1  centrosomal protein of 290 kDa isoform X2

      UniProtKB/TrEMBL
      A0A8V0YD03
      Conserved Domains (2) summary
      COG1196
      Location:100 → 465
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1275 → 1991
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    5. XM_040671188.2 → XP_040527122.1  centrosomal protein of 290 kDa isoform X2

      UniProtKB/TrEMBL
      A0A8V0YD03
      Conserved Domains (2) summary
      COG1196
      Location:100 → 465
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1275 → 1991
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    6. XM_040671227.2 → XP_040527161.1  centrosomal protein of 290 kDa isoform X3

      Conserved Domains (1) summary
      TIGR02168
      Location:693 → 1409
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      43198225..43248977 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040662292.2 → XP_040518226.1  LOW QUALITY PROTEIN: centrosomal protein of 290 kDa isoform X1

      UniProtKB/TrEMBL
      A0A8V0YD03
      Conserved Domains (2) summary
      COG1196
      Location:1722 → 2453
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:1275 → 1991
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein Strain
    Heading Accession and Version

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