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    SLC6A5 solute carrier family 6 member 5 [ Gallus gallus (chicken) ]

    Gene ID: 422974, updated on 3-Dec-2024

    Summary

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    Symbol
    SLC6A5provided by CGNC
    Full Name
    solute carrier family 6 member 5provided by CGNC
    Primary source
    CGNC:2862
    See related
    Ensembl:ENSGALG00010020232
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC6A5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (2384609..2416481)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (2379390..2411264)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene leucine twenty homeobox Neighboring gene uncharacterized LOC121110889 Neighboring gene protein arginine methyltransferase 3 Neighboring gene neural EGFL like 1 Neighboring gene microRNA 1775 Neighboring gene uncharacterized LOC121110891

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycine:sodium symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycine import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic transmission, glycinergic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium- and chloride-dependent glycine transporter 2
    Names
    solute carrier family 6 (neurotransmitter transporter), member 5
    solute carrier family 6 (neurotransmitter transporter, glycine), member 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2384609..2416481
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025151252.3 → XP_025007020.2  sodium- and chloride-dependent glycine transporter 2

      UniProtKB/TrEMBL
      A0A8V0Z6L2, A0A8V0ZDT8
      Related
      ENSGALP00010028875.1, ENSGALT00010048845.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2379390..2411264
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040673437.2 → XP_040529371.2  sodium- and chloride-dependent glycine transporter 2

      UniProtKB/TrEMBL
      A0A8V0Z6L2, A0A8V0ZDT8
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials