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    SLC26A4 solute carrier family 26 member 4 [ Gallus gallus (chicken) ]

    Gene ID: 427845, updated on 18-Sep-2024

    Summary

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    Symbol
    SLC26A4provided by CGNC
    Full Name
    solute carrier family 26 member 4provided by CGNC
    Primary source
    CGNC:6053
    See related
    Ensembl:ENSGALG00010009254
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC26A4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (14983818..15005850)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (15121235..15143267)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112533028 Neighboring gene dihydrouridine synthase 4 like Neighboring gene uncharacterized LOC121108759 Neighboring gene microRNA 2126 Neighboring gene B-cell receptor associated protein 29 Neighboring gene Cbl proto-oncogene like 1 Neighboring gene solute carrier family 26 member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables bicarbonate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chloride transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxalate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables secondary active sulfate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pendrin
    Names
    solute carrier family 26 (anion exchanger), member 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      14983818..15005850
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_425419.8 → XP_425419.3  pendrin isoform X1

      Conserved Domains (1) summary
      TIGR00815
      Location:67 → 724
      sulP; high affinity sulphate transporter 1

    2. XM_025153755.3 → XP_025009523.1  pendrin isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y9J3
      Related
      ENSGALP00010012653.1, ENSGALT00010022063.1
      Conserved Domains (2) summary
      cd07042
      Location:519 → 586
      STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
      pfam00916
      Location:2 → 350
      Sulfate_transp; Sulfate permease family

    3. XM_046943779.1 → XP_046799735.1  pendrin isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y9J3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      15121235..15143267
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040661236.2 → XP_040517170.1  pendrin isoform X1

      Conserved Domains (1) summary
      TIGR00815
      Location:67 → 724
      sulP; high affinity sulphate transporter 1

    2. XM_040661237.2 → XP_040517171.1  pendrin isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y9J3
      Conserved Domains (2) summary
      cd07042
      Location:519 → 586
      STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
      pfam00916
      Location:2 → 350
      Sulfate_transp; Sulfate permease family

    3. XM_046908709.1 → XP_046764665.1  pendrin isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y9J3
    Nucleotide Protein
    Heading Accession and Version

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