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    ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B [ Gallus gallus (chicken) ]

    Gene ID: 417927, updated on 17-Aug-2024

    Summary

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    Symbol
    ANKS1Bprovided by CGNC
    Full Name
    ankyrin repeat and sterile alpha motif domain containing 1Bprovided by CGNC
    Primary source
    CGNC:8776
    See related
    Ensembl:ENSGALG00010014314
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ANKS1B in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (46801559..47214141, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (47098876..47511161, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene IKBKB interacting protein Neighboring gene apoptotic peptidase activating factor 1 Neighboring gene UHRF1 binding protein 1 like Neighboring gene ARP6 actin-related protein 6 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and sterile alpha motif domain-containing protein 1B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001252062.3 → NP_001238991.2  ankyrin repeat and sterile alpha motif domain-containing protein 1B

      Status: INFERRED

      Source sequence(s)
      DR428735, JAENSK010000012
      Conserved Domains (8) summary
      cd09499
      Location:807 → 873
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:878 → 942
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      smart00454
      Location:804 → 869
      SAM; Sterile alpha motif
      cd00204
      Location:53 → 181
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:1042 → 1191
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      pfam12796
      Location:63 → 158
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:195 → 246
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      46801559..47214141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040696043.2 → XP_040551977.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X7

      Conserved Domains (6) summary
      cd09499
      Location:810 → 876
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:881 → 945
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      COG0666
      Location:50 → 189
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd01274
      Location:1045 → 1189
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:196 → 246
      Ank_4; Ankyrin repeats (many copies)

    2. XM_025148302.3 → XP_025004070.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X10

      Conserved Domains (6) summary
      cd09499
      Location:810 → 876
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:881 → 945
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      cd00204
      Location:53 → 181
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:1045 → 1190
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:230 → 298
      Ank_2; Ankyrin repeats (3 copies)

    3. XM_015284725.4 → XP_015140211.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X6

      Conserved Domains (8) summary
      cd09499
      Location:810 → 876
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:881 → 945
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      smart00454
      Location:807 → 872
      SAM; Sterile alpha motif
      cd00204
      Location:53 → 181
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:1045 → 1190
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      pfam12796
      Location:63 → 158
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:195 → 246
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]

    4. XM_040696039.2 → XP_040551973.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X5

      Conserved Domains (6) summary
      cd09499
      Location:810 → 876
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:881 → 945
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      COG0666
      Location:50 → 189
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd01274
      Location:1069 → 1213
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:196 → 246
      Ank_4; Ankyrin repeats (many copies)

    5. XM_025148297.3 → XP_025004065.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X9

      Conserved Domains (6) summary
      cd09499
      Location:810 → 876
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:881 → 945
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      cd00204
      Location:53 → 181
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd01274
      Location:1069 → 1214
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:230 → 298
      Ank_2; Ankyrin repeats (3 copies)

    6. XM_040696029.2 → XP_040551963.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X2

      Conserved Domains (6) summary
      cd09499
      Location:810 → 876
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:881 → 945
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      COG0666
      Location:50 → 189
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd01274
      Location:1069 → 1214
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:196 → 246
      Ank_4; Ankyrin repeats (many copies)

    7. XM_040696033.2 → XP_040551967.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X3

      Conserved Domains (6) summary
      cd09499
      Location:810 → 876
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:881 → 945
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      COG0666
      Location:50 → 189
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd01274
      Location:1070 → 1214
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:196 → 246
      Ank_4; Ankyrin repeats (many copies)

    8. XM_040696036.2 → XP_040551970.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X4

      Conserved Domains (6) summary
      cd09499
      Location:810 → 876
      SAM_AIDA1AB-like_repeat1; SAM domain of AIDA1AB-like proteins, repeat 1
      cd09500
      Location:881 → 945
      SAM_AIDA1AB-like_repeat2; SAM domain of AIDA1AB-like proteins, repeat 2
      COG0666
      Location:50 → 189
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd01274
      Location:1070 → 1215
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain
      sd00045
      Location:58 → 89
      ANK; ANK repeat [structural motif]
      pfam13637
      Location:196 → 246
      Ank_4; Ankyrin repeats (many copies)

    9. XM_046938450.1 → XP_046794406.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X1

    10. XM_040696050.1 → XP_040551984.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X8

      Related
      ENSGALP00010020247.1, ENSGALT00010034467.1
      Conserved Domains (1) summary
      cd01274
      Location:52 → 197
      PTB_Anks; Ankyrin repeat and sterile alpha motif (SAM) domain-containing (Anks) protein family Phosphotyrosine-binding (PTB) domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      47098876..47511161 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907370.1 → XP_046763326.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X7

    2. XM_046907373.1 → XP_046763329.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X10

    3. XM_046907369.1 → XP_046763325.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X6

    4. XM_046907368.1 → XP_046763324.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X5

    5. XM_046907372.1 → XP_046763328.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X9

    6. XM_046907365.1 → XP_046763321.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X2

    7. XM_046907366.1 → XP_046763322.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X3

    8. XM_046907367.1 → XP_046763323.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X4

    9. XM_046907364.1 → XP_046763320.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X1

    10. XM_046907371.1 → XP_046763327.1  ankyrin repeat and sterile alpha motif domain-containing protein 1B isoform X8

    Nucleotide Protein Strain
    Heading Accession and Version

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