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    otg2 alpha-1,3-galactosyltransferase Otg2 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2541006, updated on 18-Sep-2024

    Summary

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    Official Symbol
    otg2
    Official Full Name
    alpha-1,3-galactosyltransferase Otg2
    Primary source
    PomBase:SPBC4C3.08
    Locus tag
    SPOM_SPBC4C3.08
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    mug136
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    Genomic context

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    See otg2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (3120771..3122448, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene proteasome core particle subunit beta 1 Pre3 Neighboring gene ncRNA Neighboring gene alpha-1,3-galactosyltransferase Otg3 Neighboring gene ncRNA Neighboring gene translation initiation factor eIF3f Neighboring gene cytoskeletal protein Syp1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Substrate specificities of α1,2- and α1,3-galactosyltransferases and characterization of Gmh1p and Otg1p in Schizosaccharomyces pombe. Fukunaga T, et al. Glycobiology, 2021 Sep 9. PMID 33909078
    2. Identification of novel α1,3-galactosyltransferase and elimination of α-galactose-containing glycans by disruption of multiple α-galactosyltransferase genes in Schizosaccharomyces pombe. Ohashi T, et al. J Biol Chem, 2012 Nov 9. PMID 22988247, Free PMC Article
    3. The fission yeast nucleoporin Alm1 is required for proteasomal degradation of kinetochore components. Salas-Pino S, et al. J Cell Biol, 2017 Nov 6. PMID 28974540, Free PMC Article
    4. Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. Anver S, et al. EMBO Rep, 2014 Aug. PMID 24957674, Free PMC Article
    5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables alpha-1,3-galactosyltransferase activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables alpha-1,3-galactosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables glycosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in protein O-linked glycosylation EXP
    Inferred from Experiment
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus HDA PubMed 
    is_active_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in cytoplasm HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endoplasmic reticulum HDA PubMed 

    General protein information

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    Preferred Names
    alpha-1,3-galactosyltransferase Otg2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      3120771..3122448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022218.3 → NP_596297.1  alpha-1,3-galactosyltransferase Otg2 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596297.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O43061
      Conserved Domains (1) summary
      COG5597
      Location:1 → 368
      Gnt1; Alpha-N-acetylglucosamine transferase [Cell wall/membrane/envelope biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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