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    translation elongation factor EF-1 gamma subunit [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2542298, updated on 18-Sep-2024

    Summary

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    Official Full Name
    translation elongation factor EF-1 gamma subunit
    Primary source
    PomBase:SPAC29A4.02c
    Locus tag
    SPOM_SPAC29A4.02C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    Location:
    chromosome: I
    Exon count:
    2
    Sequence:
    Chromosome: I; NC_003424.3 (5143803..5145515)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Schizosaccharomyces specific protein Neighboring gene ncRNA Neighboring gene pseudouridylate synthase Cbf5 Neighboring gene putative mitochondrial ribosomal protein subunit Mrps9 Neighboring gene ncRNA Neighboring gene flavoprotein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Peptide elongation factor 1 from yeasts: purification and biochemical characterization of peptide elongation factors 1 alpha and 1 beta (gamma) from Saccharomyces carlsbergensis and Schizosaccharomyces pombe. Miyazaki M, et al. J Biochem, 1988 Mar. PMID 3214489
    2. Cdk inhibitor ste9p/srw1p is involved in response to protein synthesis inhibition in fission yeast. Sakai T. Biochem Biophys Res Commun, 2004 Mar 19. PMID 14985109
    3. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
    4. Large scale screening of genetic interaction with sgf73(+) in fission yeast. Guo Y, et al. Yi Chuan, 2014 Jul. PMID 25076038
    5. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables translation elongation factor activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translational elongation IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in translational elongation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    translation elongation factor EF-1 gamma subunit

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      5143803..5145515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020309.3 → NP_594880.1  translation elongation factor EF-1 gamma subunit [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594880.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O14005, P40921
      Conserved Domains (4) summary
      cd03181
      Location:89 → 211
      GST_C_EF1Bgamma_like; Glutathione S-transferase C-terminal-like, alpha helical domain of the Gamma subunit of Elongation Factor 1B and similar proteins
      COG0625
      Location:5 → 192
      GstA; Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
      cd03044
      Location:4 → 76
      GST_N_EF1Bgamma; GST_N family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of ...
      pfam00647
      Location:251 → 357
      EF1G; Elongation factor 1 gamma, conserved domain
    Nucleotide Protein
    Heading Accession and Version

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