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    esf1 pre-rRNA processing protein Esf1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540076, updated on 18-Sep-2024

    Summary

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    Official Symbol
    esf1
    Official Full Name
    pre-rRNA processing protein Esf1
    Primary source
    PomBase:SPBC1734.01c
    Locus tag
    SPOM_SPBC1734.01C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    SPBC337.17c
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    Genomic context

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    See esf1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (1059368..1061596, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene putative phosphatidyl-N-methylethanolamine N-methyltransferase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DNA polymerase delta subunit Cdc27 Neighboring gene ncRNA Neighboring gene dihydropteroate synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003423.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Proteome-wide search for PP2A substrates in fission yeast. Bernal M, et al. Proteomics, 2014 Jun. PMID 24634168
    2. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
    3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
    4. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
    5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in rRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleolus HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    pre-rRNA processing protein Esf1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      1059368..1061596 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021325.3 → NP_595418.1  pre-rRNA processing protein Esf1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595418.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O74828
      Conserved Domains (2) summary
      COG5638
      Location:10 → 682
      COG5638; Uncharacterized conserved protein [Function unknown]
      pfam08159
      Location:602 → 630
      NUC153; NUC153 domain
    Nucleotide Protein
    Heading Accession and Version

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