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    CG40198 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3354922, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG40198provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0058198
    Locus tag
    Dmel_CG40198
    See related
    AllianceGenome:FB:FBgn0058198
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE21703; Dmel\CG40198
    Summary
    Is expressed in adult fat body. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG40198 in Genome Data Viewer
    Location:
    81F5-81F5; 3-47.1 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (4160610..4162235, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3RHet NW_001848858.1 (2504376..2506001, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Glutamine:fructose-6-phosphate aminotransferase 1 Neighboring gene long non-coding RNA:CR41601 Neighboring gene long non-coding RNA:CR46431 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel mode of induction of the humoral innate immune response in Drosophila larvae. Kenmoku H, et al. Dis Model Mech, 2017 Mar 1. PMID 28250052, Free PMC Article
    2. The Organization of Pericentromeric Heterochromatin in Polytene Chromosome 3 of the Drosophilamelanogaster Line with the Rif1(1); SuUR(ES) Su(var)3-9(06) Mutations Suppressing Underreplication. Zykova T, et al. Cells, 2021 Oct 20. PMID 34831030, Free PMC Article
    3. Slowed aging during reproductive dormancy is reflected in genome-wide transcriptome changes in Drosophila melanogaster. Kučerová L, et al. BMC Genomics, 2016 Jan 13. PMID 26758761, Free PMC Article
    4. The circadian clock interacts with metabolic physiology to influence reproductive fitness. Xu K, et al. Cell Metab, 2011 Jun 8. PMID 21641546, Free PMC Article
    5. Microbiota-induced changes in drosophila melanogaster host gene expression and gut morphology. Broderick NA, et al. mBio, 2014 May 27. PMID 24865556, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG40198-PB
    CG40198-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      4160610..4162235 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001276244.1 → NP_001263173.1  uncharacterized protein Dmel_CG40198, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001263173.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5LK11, Q8SWU8
      Conserved Domains (1) summary
      PRK14950
      Location:90 → 165
      PRK14950; DNA polymerase III subunits gamma and tau; Provisional

    2. NM_001015164.4 → NP_001015164.3  uncharacterized protein Dmel_CG40198, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001015164.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5LK11, Q8SWU8
      Conserved Domains (1) summary
      PRK14950
      Location:90 → 165
      PRK14950; DNA polymerase III subunits gamma and tau; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SWU8 Q8SWU8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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