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    CG42340 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 7354472, updated on 9-Dec-2024

    Summary

    Official Symbol
    CG42340provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0259242
    Locus tag
    Dmel_CG42340
    See related
    AllianceGenome:FB:FBgn0259242
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG12543; CG3367; Dmel\CG42340
    Old locus tag
    Dmel_CG12543; Dmel_CG3367
    Summary
    Predicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See CG42340 in Genome Data Viewer
    Location:
    6A1-6B1; 1-17 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6423123..6524323, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6317156..6418356, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene transfer RNA:Phenylalanine-GAA 1-1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Alanine-glyoxylate aminotransferase

    Genomic regions, transcripts, and products

    General gene information

    mobile_element

    • Loc: c6435212-6430043 mobile_element_type = transposon:Rt1b{}71
    • Loc: c6451058-6445358 mobile_element_type = transposon:297{}72

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables outward rectifier potassium channel activity  
    enables potassium channel activity  
    enables potassium ion leak channel activity  
    Component Evidence Code Pubs
    located_in membrane  
    is_active_in plasma membrane  

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG42340-PB
    CG42340-PC
    CG42340-PD
    CG42340-PE

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      6423123..6524323 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001272346.1 → NP_001259275.1  uncharacterized protein Dmel_CG42340, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259275.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0W7, Q29R21
      Conserved Domains (1) summary
      pfam07885
      Location:208 → 264
      Ion_trans_2; Ion channel
    2. NM_001144693.2 → NP_001138165.1  uncharacterized protein Dmel_CG42340, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001138165.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z0W7, Q29R21
      Conserved Domains (1) summary
      pfam07885
      Location:208 → 264
      Ion_trans_2; Ion channel
    3. NM_001382086.1 → NP_001368973.1  uncharacterized protein Dmel_CG42340, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A6H2EDG1
      Conserved Domains (1) summary
      pfam07885
      Location:208 → 264
      Ion_trans_2; Ion channel
    4. NM_132093.3 → NP_572321.3  uncharacterized protein Dmel_CG42340, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572321.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      R9PY17
      Conserved Domains (2) summary
      pfam00520
      Location:376 → 453
      Ion_trans; Ion transport protein
      pfam07885
      Location:208 → 264
      Ion_trans_2; Ion channel
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