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    Rint1 RAD50 interactor 1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38807, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rint1provided by FlyBase
    Official Full Name
    RAD50 interactor 1provided by FlyBase
    Primary source
    FLYBASE:FBgn0035762
    Locus tag
    Dmel_CG8605
    See related
    AllianceGenome:FB:FBgn0035762
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG8605; Dmel\CG8605; Rint-1; rint1; Tip20
    Summary
    Involved in Golgi organization; cleavage furrow ingression; and male meiosis cytokinesis. Predicted to be located in endoplasmic reticulum. Predicted to be part of Dsl1/NZR complex. Is expressed in several structures, including adult head; embryonic/larval salivary gland; gut section; hindgut proper primordium; and posterior midgut primordium. Human ortholog(s) of this gene implicated in infantile liver failure syndrome. Orthologous to human RINT1 (RAD50 interactor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Rint1 in Genome Data Viewer
    Location:
    65F4-65F4; 3-20 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (7323619..7326255)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (7316719..7319355)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene unc-13-4A Neighboring gene uncharacterized protein Neighboring gene Rho guanine nucleotide exchange factor 4 Neighboring gene minerva Neighboring gene uncharacterized protein Neighboring gene mutagen-sensitive 312

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of Dsl1/NZR complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Dsl1/NZR complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of Dsl1/NZR complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in endoplasmic reticulum ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    RAD50 interactor 1
    Names
    CG8605-PA
    RINT1 ortholog
    Rint1-PA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      7323619..7326255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139845.3NP_648102.2  RAD50 interactor 1 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648102.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q961W7, Q9VS46
      UniProtKB/TrEMBL
      B6IDL7
      Related
      FBpp0076549
      Conserved Domains (1) summary
      pfam04437
      Location:259718
      RINT1_TIP1; RINT-1 / TIP-1 family