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    CG4009 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42054, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG4009provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038469
    Locus tag
    Dmel_CG4009
    See related
    AllianceGenome:FB:FBgn0038469
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG4009
    Summary
    Predicted to enable peroxidase activity. Predicted to be involved in response to oxidative stress. Located in egg chorion. Is expressed in spermatozoon. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG4009 in Genome Data Viewer
    Location:
    89E10-89E10; 3-59 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (17033588..17036045, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (12859310..12861767, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene tRNA methyltransferase 7-32

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila Fed ARA and EPA Yields Eicosanoids, 15S-Hydroxy-5Z,8Z, 11Z, 13E-Eicosatetraenoic Acid, and 15S-Hydroxy-5Z,8Z,11Z,13E,17Z-Eicosapentaenoic Acid. Tan L, et al. Lipids, 2016 Apr. PMID 26931457
    2. Dietary Curcumin Intake and Its Effects on the Transcriptome and Metabolome of Drosophila melanogaster. Belcher S, et al. Int J Mol Sci, 2024 Jun 14. PMID 38928266, Free PMC Article
    3. A combined computational strategy of sequence and structural analysis predicts the existence of a functional eicosanoid pathway in Drosophila melanogaster. Scarpati M, et al. PLoS One, 2019. PMID 30753230, Free PMC Article
    4. Painting of Fourth and the X-Linked 1.688 Satellite in D. melanogaster is Involved in Chromosome-Wide Gene Regulation. Ekhteraei-Tousi S, et al. Cells, 2020 Jan 30. PMID 32019091, Free PMC Article
    5. Genome-wide genetic screen identified the link between dG9a and epidermal growth factor receptor signaling pathway in vivo. Shimaji K, et al. Exp Cell Res, 2016 Aug 1. PMID 27343629

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peroxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in egg chorion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG4009-PB
    CG4009-PC
    NP_001262655.1
    NP_650588.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      17033588..17036045 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275726.1 → NP_001262655.1  uncharacterized protein Dmel_CG4009, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262655.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B5RJI8, Q9VEP3
      Conserved Domains (3) summary
      cd09823
      Location:228 → 605
      peroxinectin_like; peroxinectin_like animal heme peroxidases
      cl14561
      Location:77 → 367
      An_peroxidase_like; Animal heme peroxidases and related proteins
      pfam03098
      Location:95 → 610
      An_peroxidase; Animal haem peroxidase

    2. NM_142331.2 → NP_650588.2  uncharacterized protein Dmel_CG4009, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650588.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B5RJI8, Q9VEP3
      Conserved Domains (3) summary
      cd09823
      Location:228 → 605
      peroxinectin_like; peroxinectin_like animal heme peroxidases
      cl14561
      Location:77 → 367
      An_peroxidase_like; Animal heme peroxidases and related proteins
      pfam03098
      Location:95 → 610
      An_peroxidase; Animal haem peroxidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VEP3 Q9VEP3

    Gene LinkOut

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