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    H2ap H2A.P histone [ Rattus norvegicus (Norway rat) ]

    Gene ID: 367734, updated on 9-Dec-2024

    Summary

    Official Symbol
    H2approvided by RGD
    Official Full Name
    H2A.P histoneprovided by RGD
    Primary source
    RGD:1563155
    See related
    EnsemblRapid:ENSRNOG00000089464 AllianceGenome:RGD:1563155
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Hypm; RGD1563155
    Summary
    Predicted to be a structural constituent of chromatin. Predicted to be involved in heterochromatin formation. Predicted to be part of nucleosome. Predicted to be active in nucleus. Orthologous to human H2AP (H2A.P histone). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See H2ap in Genome Data Viewer
    Location:
    Xq12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (15580476..15581030, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (12907962..12908516, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (13989401..13989955)

    Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene sushi-repeat-containing protein, X-linked Neighboring gene synaptotagmin-like 5 Neighboring gene H2A.L variant histone 3 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene uncharacterized LOC102551428

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    huntingtin-interacting protein M
    Names
    huntingtin interacting protein M

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001134598.1NP_001128070.1  huntingtin-interacting protein M

      See identical proteins and their annotated locations for NP_001128070.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474009
      UniProtKB/TrEMBL
      A6K026
      Related
      ENSRNOP00000104848.1, ENSRNOT00000138647.1
      Conserved Domains (1) summary
      smart00414
      Location:2182
      H2A; Histone 2A

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086039.1 Reference GRCr8

      Range
      15580476..15581030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)