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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_016022.2 RefSeqGene
- Range
-
5032..495724
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001166018.2 → NP_001159490.1 POU domain, class 6, transcription factor 2 isoform 2
See identical proteins and their annotated locations for NP_001159490.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame segment in the 3' coding region, as compared to variant 1. The resulting isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC005483, AC011292, AC073345, AC092174
- UniProtKB/TrEMBL
-
A0A140GPP8
- Conserved Domains (2) summary
-
- pfam00046
Location:574 → 627
- Homeobox; Homeobox domain
- cl22952
Location:477 → 550
- Pou; Pou domain - N-terminal to homeobox domain
-
NM_001370959.1 → NP_001357888.1 POU domain, class 6, transcription factor 2 isoform 3
Status: REVIEWED
- Source sequence(s)
-
AC005483, AC011292, AC073345, AC092174
- Consensus CDS
-
CCDS94088.1
- UniProtKB/TrEMBL
- A0A140GPP8, A0A6E1XZL4
- Related
- ENSP00000430514.3, ENST00000518318.7
- Conserved Domains (2) summary
-
- pfam00046
Location:639 → 693
- Homeobox; Homeobox domain
- cl22952
Location:506 → 615
- Pou; Pou domain - N-terminal to homeobox domain
-
NM_007252.4 → NP_009183.3 POU domain, class 6, transcription factor 2 isoform 1
See identical proteins and their annotated locations for NP_009183.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) is the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC005483, AC011292, AC073345, AC092174
- UniProtKB/Swiss-Prot
- A4D1W2, C4AMB9, P78424, P78425, Q75ME8, Q86UM6, Q9UDS7
- UniProtKB/TrEMBL
-
A0A140GPP8
- Related
- ENSP00000384004.1, ENST00000403058.6
- Conserved Domains (2) summary
-
- pfam00046
Location:610 → 663
- Homeobox; Homeobox domain
- cl22952
Location:477 → 586
- Pou; Pou domain - N-terminal to homeobox domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
38977909..39468601
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047419843.1 → XP_047275799.1 POU domain, class 6, transcription factor 2 isoform X1
- UniProtKB/TrEMBL
-
A0A140GPP8
-
XM_047419845.1 → XP_047275801.1 POU domain, class 6, transcription factor 2 isoform X2
- UniProtKB/TrEMBL
-
A0A140GPP8
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
39134935..39626147
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054357177.1 → XP_054213152.1 POU domain, class 6, transcription factor 2 isoform X1
- UniProtKB/TrEMBL
-
A0A140GPP8
-
XM_054357178.1 → XP_054213153.1 POU domain, class 6, transcription factor 2 isoform X2
- UniProtKB/TrEMBL
-
A0A140GPP8