NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_023260.1 RefSeqGene
- Range
-
5106..107545
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001003941.3 → NP_001003941.1 2-oxoglutarate dehydrogenase complex component E1 isoform 2 precursor
See identical proteins and their annotated locations for NP_001003941.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the 3' end of coding region, compared to variant 1. Variant 2 encodes isoform 2 which has a shorter and distinct C-terminus, compared to isoform 1. Variant 2 is supported by transcriptional evidence although the protein product is predicted.
- Source sequence(s)
-
BC009580
- Consensus CDS
-
CCDS47580.1
- UniProtKB/TrEMBL
-
A0A140VJQ5
- Related
- ENSP00000388084.2, ENST00000443864.6
- Conserved Domains (1) summary
-
- cl25580
Location:49 → 405
- OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal
-
NM_001165036.2 → NP_001158508.1 2-oxoglutarate dehydrogenase complex component E1 isoform 3 precursor
See identical proteins and their annotated locations for NP_001158508.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) has multiple differences in the presence and absence of exons in the 5' coding region, compared to variant 1. These differences result in a shorter protein (isoform 3), compared to isoform 1.
- Source sequence(s)
-
AC004859, AK304439, AK304690, BU682361
- Consensus CDS
-
CCDS55107.1
- UniProtKB/TrEMBL
-
B4DF00
- Related
- ENSP00000392878.1, ENST00000449767.5
- Conserved Domains (1) summary
-
- PRK09404
Location:49 → 1011
- sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
-
NM_001363523.2 → NP_001350452.1 2-oxoglutarate dehydrogenase complex component E1 isoform 4 precursor
Status: REVIEWED
- Source sequence(s)
-
AC004859, AC011894
- Consensus CDS
-
CCDS87498.1
- UniProtKB/TrEMBL
- B4DF00, E9PDF2
- Related
- ENSP00000388183.1, ENST00000447398.6
- Conserved Domains (1) summary
-
- PRK09404
Location:49 → 1026
- sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
-
NM_002541.4 → NP_002532.2 2-oxoglutarate dehydrogenase complex component E1 isoform 1 precursor
See identical proteins and their annotated locations for NP_002532.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC004859, AK304690, AK314179, BU682361
- Consensus CDS
-
CCDS34627.1
- UniProtKB/Swiss-Prot
- B4E2U9, D3DVL0, E9PBM1, Q02218, Q96DD3, Q9UDX0
- UniProtKB/TrEMBL
-
B4DF00
- Related
- ENSP00000222673.5, ENST00000222673.6
- Conserved Domains (1) summary
-
- PRK09404
Location:49 → 1015
- sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
44606627..44709066
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047420428.1 → XP_047276384.1 2-oxoglutarate dehydrogenase complex component E1 isoform X3
- UniProtKB/TrEMBL
-
B4DF00
-
XM_011515408.3 → XP_011513710.1 2-oxoglutarate dehydrogenase complex component E1 isoform X1
See identical proteins and their annotated locations for XP_011513710.1
- UniProtKB/TrEMBL
- B4DF00, E9PCR7
- Conserved Domains (1) summary
-
- PRK09404
Location:49 → 1030
- sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
-
XM_047420427.1 → XP_047276383.1 2-oxoglutarate dehydrogenase complex component E1 isoform X2
- UniProtKB/Swiss-Prot
- B4E2U9, D3DVL0, E9PBM1, Q02218, Q96DD3, Q9UDX0
- UniProtKB/TrEMBL
-
B4DF00
-
XM_005249759.6 → XP_005249816.1 2-oxoglutarate dehydrogenase complex component E1 isoform X1
See identical proteins and their annotated locations for XP_005249816.1
- UniProtKB/TrEMBL
- B4DF00, E9PCR7
- Related
- ENSP00000414662.1, ENST00000444676.5
- Conserved Domains (1) summary
-
- PRK09404
Location:49 → 1030
- sucA; 2-oxoglutarate dehydrogenase E1 component; Reviewed
-
XM_047420426.1 → XP_047276382.1 2-oxoglutarate dehydrogenase complex component E1 isoform X1
- UniProtKB/TrEMBL
- B4DF00, E9PCR7
-
XM_047420429.1 → XP_047276385.1 2-oxoglutarate dehydrogenase complex component E1 isoform X4
- UniProtKB/TrEMBL
-
B4DZ95
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
44766778..44869231
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054358311.1 → XP_054214286.1 2-oxoglutarate dehydrogenase complex component E1 isoform X3
- UniProtKB/TrEMBL
-
B4DF00
-
XM_054358308.1 → XP_054214283.1 2-oxoglutarate dehydrogenase complex component E1 isoform X1
- UniProtKB/TrEMBL
-
B4DF00
-
XM_054358310.1 → XP_054214285.1 2-oxoglutarate dehydrogenase complex component E1 isoform X2
- UniProtKB/TrEMBL
-
B4DF00
-
XM_054358307.1 → XP_054214282.1 2-oxoglutarate dehydrogenase complex component E1 isoform X1
- UniProtKB/TrEMBL
-
B4DF00
-
XM_054358309.1 → XP_054214284.1 2-oxoglutarate dehydrogenase complex component E1 isoform X1
- UniProtKB/TrEMBL
-
B4DF00
-
XM_054358312.1 → XP_054214287.1 2-oxoglutarate dehydrogenase complex component E1 isoform X4
- UniProtKB/TrEMBL
- B4DH65, B4DZ95