NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001017388.3 → NP_001017388.1 toll-like receptor 10 isoform a precursor
See identical proteins and their annotated locations for NP_001017388.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks two exons in the 5' UTR, compared to variant 1. Variants 1-4 encode the same protein (isoform a).
- Source sequence(s)
-
AC118137, AY358300, DA643313
- Consensus CDS
-
CCDS3445.1
- UniProtKB/Swiss-Prot
- A8K7L1, B3Y668, D1CS21, D1CS22, Q32MI7, Q32MI8, Q5FWG4, Q6UXL3, Q9BXR5
- UniProtKB/TrEMBL
-
D1CS28
- Related
- ENSP00000354459.2, ENST00000361424.6
- Conserved Domains (6) summary
-
- smart00082
Location:522 → 574
- LRRCT; Leucine rich repeat C-terminal domain
- smart00255
Location:633 → 775
- TIR; Toll - interleukin 1 - resistance
- COG4886
Location:289 → 522
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00031
Location:50 → 73
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:350 → 373
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:72 → 129
- LRR_8; Leucine rich repeat
-
NM_001195106.2 → NP_001182035.1 toll-like receptor 10 isoform a precursor
See identical proteins and their annotated locations for NP_001182035.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks one exon in the 5' UTR, compared to variant 1. Variants 1-4 encode the same protein (isoform a).
- Source sequence(s)
-
AC118137, AW504309, AY358300, DA213264, DA643313
- Consensus CDS
-
CCDS3445.1
- UniProtKB/Swiss-Prot
- A8K7L1, B3Y668, D1CS21, D1CS22, Q32MI7, Q32MI8, Q5FWG4, Q6UXL3, Q9BXR5
- UniProtKB/TrEMBL
-
D1CS28
- Related
- ENSP00000478206.1, ENST00000613579.4
- Conserved Domains (6) summary
-
- smart00082
Location:522 → 574
- LRRCT; Leucine rich repeat C-terminal domain
- smart00255
Location:633 → 775
- TIR; Toll - interleukin 1 - resistance
- COG4886
Location:289 → 522
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00031
Location:50 → 73
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:350 → 373
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:72 → 129
- LRR_8; Leucine rich repeat
-
NM_001195107.2 → NP_001182036.1 toll-like receptor 10 isoform a precursor
See identical proteins and their annotated locations for NP_001182036.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks one exon in the 5' UTR, compared to variant 1. Variants 1-4 encode the same protein (isoform a).
- Source sequence(s)
-
AC118137, AF296673, AY358300, DA312129, DA643313
- Consensus CDS
-
CCDS3445.1
- UniProtKB/Swiss-Prot
- A8K7L1, B3Y668, D1CS21, D1CS22, Q32MI7, Q32MI8, Q5FWG4, Q6UXL3, Q9BXR5
- UniProtKB/TrEMBL
-
D1CS28
- Related
- ENSP00000478985.1, ENST00000622002.4
- Conserved Domains (6) summary
-
- smart00082
Location:522 → 574
- LRRCT; Leucine rich repeat C-terminal domain
- smart00255
Location:633 → 775
- TIR; Toll - interleukin 1 - resistance
- COG4886
Location:289 → 522
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00031
Location:50 → 73
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:350 → 373
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:72 → 129
- LRR_8; Leucine rich repeat
-
NM_001195108.2 → NP_001182037.1 toll-like receptor 10 isoform b
See identical proteins and their annotated locations for NP_001182037.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an alternate exon in the 5' UTR and uses a different splice site which results in part of the 5' coding region being absent, compared to variant 1. The resulting predicted protein (isoform b) has a shorter N-terminus and is missing a potential signal peptide when it is compared to isoform a.
- Source sequence(s)
-
AC118137, AF296673, AY358300, BP383038, DA643313
- UniProtKB/TrEMBL
-
D1CS28
- Conserved Domains (6) summary
-
- smart00082
Location:508 → 560
- LRRCT; Leucine rich repeat C-terminal domain
- smart00255
Location:619 → 761
- TIR; Toll - interleukin 1 - resistance
- cd00116
Location:334 → 441
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00031
Location:36 → 59
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:336 → 359
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:58 → 115
- LRR_8; Leucine rich repeat
-
NM_030956.4 → NP_112218.2 toll-like receptor 10 isoform a precursor
See identical proteins and their annotated locations for NP_112218.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript. Variants 1-4 encode the same protein (isoform a).
- Source sequence(s)
-
AC118137, AF296673, AY358300, DA643313, DB226380
- Consensus CDS
-
CCDS3445.1
- UniProtKB/Swiss-Prot
- A8K7L1, B3Y668, D1CS21, D1CS22, Q32MI7, Q32MI8, Q5FWG4, Q6UXL3, Q9BXR5
- UniProtKB/TrEMBL
-
D1CS28
- Related
- ENSP00000308925.4, ENST00000308973.9
- Conserved Domains (6) summary
-
- smart00082
Location:522 → 574
- LRRCT; Leucine rich repeat C-terminal domain
- smart00255
Location:633 → 775
- TIR; Toll - interleukin 1 - resistance
- COG4886
Location:289 → 522
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00031
Location:50 → 73
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:350 → 373
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:72 → 129
- LRR_8; Leucine rich repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000004.12 Reference GRCh38.p14 Primary Assembly
- Range
-
38772238..38782990 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011513760.3 → XP_011512062.1 toll-like receptor 10 isoform X1
See identical proteins and their annotated locations for XP_011512062.1
- UniProtKB/TrEMBL
-
D1CS28
- Conserved Domains (6) summary
-
- smart00082
Location:508 → 560
- LRRCT; Leucine rich repeat C-terminal domain
- smart00255
Location:619 → 761
- TIR; Toll - interleukin 1 - resistance
- cd00116
Location:334 → 441
- LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
- sd00031
Location:36 → 59
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:336 → 359
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:58 → 115
- LRR_8; Leucine rich repeat
-
XM_011513762.3 → XP_011512064.1 toll-like receptor 10 isoform X2
See identical proteins and their annotated locations for XP_011512064.1
- UniProtKB/Swiss-Prot
- A8K7L1, B3Y668, D1CS21, D1CS22, Q32MI7, Q32MI8, Q5FWG4, Q6UXL3, Q9BXR5
- UniProtKB/TrEMBL
-
D1CS28
- Conserved Domains (6) summary
-
- smart00082
Location:522 → 574
- LRRCT; Leucine rich repeat C-terminal domain
- smart00255
Location:633 → 775
- TIR; Toll - interleukin 1 - resistance
- COG4886
Location:289 → 522
- LRR; Leucine-rich repeat (LRR) protein [Transcription]
- sd00031
Location:50 → 73
- LRR_1; leucine-rich repeat [structural motif]
- sd00033
Location:350 → 373
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:72 → 129
- LRR_8; Leucine rich repeat
-
XM_047416227.1 → XP_047272183.1 toll-like receptor 10 isoform X1
- UniProtKB/TrEMBL
-
D1CS28
-
XM_047416226.1 → XP_047272182.1 toll-like receptor 10 isoform X2
- UniProtKB/Swiss-Prot
- A8K7L1, B3Y668, D1CS21, D1CS22, Q32MI7, Q32MI8, Q5FWG4, Q6UXL3, Q9BXR5
- UniProtKB/TrEMBL
-
D1CS28
- Related
- ENSP00000424923.1, ENST00000508334.1
-
XM_047416224.1 → XP_047272180.1 toll-like receptor 10 isoform X2
- UniProtKB/Swiss-Prot
- A8K7L1, B3Y668, D1CS21, D1CS22, Q32MI7, Q32MI8, Q5FWG4, Q6UXL3, Q9BXR5
- UniProtKB/TrEMBL
-
D1CS28
-
XM_047416225.1 → XP_047272181.1 toll-like receptor 10 isoform X2
- UniProtKB/Swiss-Prot
- A8K7L1, B3Y668, D1CS21, D1CS22, Q32MI7, Q32MI8, Q5FWG4, Q6UXL3, Q9BXR5
- UniProtKB/TrEMBL
-
D1CS28
- Related
- ENSP00000421483.1, ENST00000506111.1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060928.1 Alternate T2T-CHM13v2.0
- Range
-
38742654..38753390 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054350940.1 → XP_054206915.1 toll-like receptor 10 isoform X1
- UniProtKB/TrEMBL
-
D1CS30
-
XM_054350942.1 → XP_054206917.1 toll-like receptor 10 isoform X2
- UniProtKB/TrEMBL
-
D1CS30
-
XM_054350943.1 → XP_054206918.1 toll-like receptor 10 isoform X2
- UniProtKB/TrEMBL
-
D1CS30
-
XM_054350941.1 → XP_054206916.1 toll-like receptor 10 isoform X2
- UniProtKB/TrEMBL
-
D1CS30