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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001012267.3 → NP_001012267.1 centromere protein P isoform a
See identical proteins and their annotated locations for NP_001012267.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AL157827, AL833701, BC071726
- Consensus CDS
-
CCDS35063.1
- UniProtKB/Swiss-Prot
- B3KRA5, B3KS17, Q5T9F8, Q5T9F9, Q6IPU0
- Related
- ENSP00000364737.3, ENST00000375587.8
- Conserved Domains (1) summary
-
- pfam13096
Location:103 → 279
- CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
-
NM_001286969.1 → NP_001273898.1 centromere protein P isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate exon in the 5' region, which results in translation initiation from a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a.
- Source sequence(s)
-
AL833701, BX537851, DB056659
- UniProtKB/TrEMBL
-
Q7Z672
- Conserved Domains (1) summary
-
- pfam13096
Location:1 → 167
- CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
-
NM_001286971.1 → NP_001273900.1 centromere protein P isoform c
See identical proteins and their annotated locations for NP_001273900.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) lacks several 5' exons but includes an alternate 5' terminal exon, and it thus differs in the 5' UTR and 5' coding region, compared to variant 1. The encoded isoform (c) has a distinct N-terminus and is shorter than isoform a.
- Source sequence(s)
-
AK091247, AL833701
- Consensus CDS
-
CCDS69618.1
- UniProtKB/TrEMBL
-
X6R9C8
- Related
- ENSP00000364729.3, ENST00000375579.7
- Conserved Domains (1) summary
-
- pfam13096
Location:15 → 106
- CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
92325468..92620529
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011518689.2 → XP_011516991.1 centromere protein P isoform X3
- UniProtKB/TrEMBL
-
A0AAG2UUV8
- Conserved Domains (1) summary
-
- pfam13096
Location:103 → 188
- CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
-
XM_047423391.1 → XP_047279347.1 centromere protein P isoform X4
- UniProtKB/TrEMBL
-
A0AAG2UUV8
-
XM_047423392.1 → XP_047279348.1 centromere protein P isoform X5
-
XM_011518685.3 → XP_011516987.1 centromere protein P isoform X1
- Conserved Domains (1) summary
-
- pfam13096
Location:103 → 156
- CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
-
XM_024447543.2 → XP_024303311.1 centromere protein P isoform X2
- Conserved Domains (1) summary
-
- pfam13096
Location:11 → 187
- CENP-P; CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P
Reference GRCh38.p14 PATCHES
Genomic
-
NW_025791788.1 Reference GRCh38.p14 PATCHES
- Range
-
160197..455260
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333091.1 → XP_054189066.1 centromere protein P isoform X3
- UniProtKB/TrEMBL
-
A0AAG2UUV8
-
XM_054333092.1 → XP_054189067.1 centromere protein P isoform X4
- UniProtKB/TrEMBL
-
A0AAG2UUV8
-
XM_054333093.1 → XP_054189068.1 centromere protein P isoform X5
-
XM_054333089.1 → XP_054189064.1 centromere protein P isoform X1
-
XM_054333090.1 → XP_054189065.1 centromere protein P isoform X2
-
XM_054333088.1 → XP_054189063.1 centromere protein P isoform X6
RNA
-
XR_008485822.1 RNA Sequence
-
XR_008485820.1 RNA Sequence
-
XR_008485821.1 RNA Sequence
-
XR_008485823.1 RNA Sequence
-
XR_008485824.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
104491997..104787103
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054362969.1 → XP_054218944.1 centromere protein P isoform X3
- UniProtKB/TrEMBL
-
A0AAG2UUV8
-
XM_054362970.1 → XP_054218945.1 centromere protein P isoform X4
- UniProtKB/TrEMBL
-
A0AAG2UUV8
-
XM_054362971.1 → XP_054218946.1 centromere protein P isoform X5
-
XM_054362967.1 → XP_054218942.1 centromere protein P isoform X1
-
XM_054362968.1 → XP_054218943.1 centromere protein P isoform X2
-
XM_054362966.1 → XP_054218941.1 centromere protein P isoform X7
RNA
-
XR_008488021.1 RNA Sequence
-
XR_008488019.1 RNA Sequence
-
XR_008488020.1 RNA Sequence
-
XR_008488022.1 RNA Sequence
-
XR_008488023.1 RNA Sequence