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    MRPL20-AS1 MRPL20 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 148413, updated on 10-Dec-2024

    Summary

    Official Symbol
    MRPL20-AS1provided by HGNC
    Official Full Name
    MRPL20 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:27125
    See related
    Ensembl:ENSG00000224870 AllianceGenome:HGNC:27125
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in lymph node (RPKM 7.6), prostate (RPKM 7.4) and 25 other tissues See more
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    Genomic context

    See MRPL20-AS1 in Genome Data Viewer
    Location:
    1p36.33
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (1399530..1402046)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (831460..833976)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (1334910..1337426)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit B4 pseudogene 8 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:1317401-1317943 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:1317944-1318485 Neighboring gene cyclin L2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:1328342-1328842 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 69 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 70 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 71 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:1335653-1336196 Neighboring gene mitochondrial ribosomal protein L20 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:1341870-1342536 Neighboring gene RNA, 7SL, cytoplasmic 657, pseudogene Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:1342537-1343204 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:1343205-1343871 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:1344795-1345682 Neighboring gene MRPL20 divergent transcript Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:1345683-1346571

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_015434.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC005108, BC104242
      Related
      ENST00000448629.9

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      1399530..1402046
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      831460..833976
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)