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    LINC00595 long intergenic non-protein coding RNA 595 [ Homo sapiens (human) ]

    Gene ID: 414243, updated on 22-Oct-2024

    Summary

    Official Symbol
    LINC00595provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 595provided by HGNC
    Primary source
    HGNC:HGNC:31430
    See related
    Ensembl:ENSG00000230417 AllianceGenome:HGNC:31430
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    C10orf101
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC00595 in Genome Data Viewer
    Location:
    10q22.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (78267342..78280213)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (79136415..79149280)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (80027099..80039970)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902467 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3617 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80011981-80012494 Neighboring gene long intergenic non-protein coding RNA 856 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:80015479-80016678 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:80026770-80027320 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:80027321-80027869 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:80052421-80053352 Neighboring gene uncharacterized LOC124902468 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2518 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80088023-80088524 Neighboring gene uncharacterized LOC124902568

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_073447.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010163
      Related
      ENST00000476909.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      78267342..78280213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      79136415..79149280
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)