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    Dnajc25 DnaJ heat shock protein family (Hsp40) member C25 [ Mus musculus (house mouse) ]

    Gene ID: 72429, updated on 9-Dec-2024

    Summary

    Official Symbol
    Dnajc25provided by MGI
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member C25provided by MGI
    Primary source
    MGI:MGI:1919679
    See related
    Ensembl:ENSMUSG00000070972 AllianceGenome:MGI:1919679
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2010109C08Rik; 2010203O07Rik
    Summary
    Predicted to be involved in protein folding. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to several human genes including DNAJC25 (DnaJ heat shock protein family (Hsp40) member C25). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in ovary adult (RPKM 8.6), adrenal adult (RPKM 6.2) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Dnajc25 in Genome Data Viewer
    Location:
    4 B3; 4 32.36 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (58995215..59025573)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (58994799..59025573)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene zinc finger with KRAB and SCAN domains 16 Neighboring gene prostaglandin reductase 1 Neighboring gene STARR-positive B cell enhancer ABC_E9587 Neighboring gene guanine nucleotide binding protein (G protein), gamma 10 Neighboring gene shortage in chiasmata 1 Neighboring gene STARR-positive B cell enhancer ABC_E10236 Neighboring gene STARR-seq mESC enhancer starr_10367 Neighboring gene predicted gene, 35527

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in protein folding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    dnaJ homolog subfamily C member 25
    Names
    DnaJ (Hsp40) homolog, subfamily C, member 25

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033165.3NP_001028337.2  dnaJ homolog subfamily C member 25 precursor

      See identical proteins and their annotated locations for NP_001028337.2

      Status: VALIDATED

      Source sequence(s)
      AI480957, AK136359, BI133646, BM951172, BX512063
      Consensus CDS
      CCDS18216.2
      UniProtKB/Swiss-Prot
      A2ALW4, A2ALW5, Q0VBC8, Q3UWH0
      Related
      ENSMUSP00000092680.4, ENSMUST00000095070.4
      Conserved Domains (1) summary
      pfam00226
      Location:48118
      DnaJ; DnaJ domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      58995215..59025573
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006538276.5XP_006538339.1  dnaJ homolog subfamily C member 25 isoform X1

      See identical proteins and their annotated locations for XP_006538339.1

      UniProtKB/Swiss-Prot
      A2ALW5
      Related
      ENSMUSP00000118048.3, ENSMUST00000152199.9
    2. XM_006538275.4XP_006538338.1  dnaJ homolog subfamily C member 25 isoform X1

      See identical proteins and their annotated locations for XP_006538338.1

      UniProtKB/Swiss-Prot
      A2ALW5