U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Rln1 relaxin 1 [ Mus musculus (house mouse) ]

    Gene ID: 19773, updated on 9-Dec-2024

    Summary

    Official Symbol
    Rln1provided by MGI
    Official Full Name
    relaxin 1provided by MGI
    Primary source
    MGI:MGI:97931
    See related
    Ensembl:ENSMUSG00000039097 AllianceGenome:MGI:97931
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Rln; rlx
    Summary
    Enables signaling receptor binding activity. Involved in mammary gland development; regulation of apoptotic process; and spermatogenesis. Acts upstream of or within prostate gland growth and regulation of nitric oxide mediated signal transduction. Predicted to be located in extracellular region. Is expressed in several structures, including Harderian gland; alimentary system; genitourinary system; immune system; and liver and biliary system. Orthologous to human RLN1 (relaxin 1) and RLN2 (relaxin 2). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in CNS E18 (RPKM 1.4), CNS E14 (RPKM 0.5) and 9 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Rln1 in Genome Data Viewer
    Location:
    19 C1; 19 23.83 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (29309155..29312070, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (29331755..29334670, complement)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41829 Neighboring gene STARR-positive B cell enhancer ABC_E11673 Neighboring gene Janus kinase 2 Neighboring gene STARR-seq mESC enhancer starr_45882 Neighboring gene STARR-seq mESC enhancer starr_45883 Neighboring gene insulin-like 6 Neighboring gene predicted gene, 52390 Neighboring gene STARR-positive B cell enhancer ABC_E9996 Neighboring gene plasminogen receptor, C-terminal lysine transmembrane protein Neighboring gene STARR-positive B cell enhancer ABC_E3250 Neighboring gene STARR-positive B cell enhancer ABC_E5694 Neighboring gene CD274 antigen Neighboring gene predicted gene, 36043

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables signaling receptor binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011272.2NP_035402.2  prorelaxin 1 precursor

      See identical proteins and their annotated locations for NP_035402.2

      Status: PROVISIONAL

      Source sequence(s)
      BC132656
      Consensus CDS
      CCDS29733.1
      UniProtKB/Swiss-Prot
      P47932
      UniProtKB/TrEMBL
      A2RTV8, Q2M2Q1
      Related
      ENSMUSP00000043376.5, ENSMUST00000044143.6
      Conserved Domains (1) summary
      cd04365
      Location:145183
      IlGF_relaxin_like; IlGF_like family, relaxin_like subgroup, specific to vertebrates. Members include a number of active peptides including (pro)relaxin, mammalian Leydig cell-specific insulin-like peptide (gene INSL3), early placenta insulin-like peptide (ELIP; gene INSL4), ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      29309155..29312070 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)