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    Glt28d2 glycosyltransferase 28 domain containing 2 [ Mus musculus (house mouse) ]

    Gene ID: 320302, updated on 9-Dec-2024

    Summary

    Official Symbol
    Glt28d2provided by MGI
    Official Full Name
    glycosyltransferase 28 domain containing 2provided by MGI
    Primary source
    MGI:MGI:2443773
    See related
    Ensembl:ENSMUSG00000031286 AllianceGenome:MGI:2443773
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Glt28d1l; 4732486J07Rik
    Summary
    Is expressed in bladder; cerebral cortex subventricular zone; cerebral cortex ventricular layer; and urinary system. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in mammary gland adult (RPKM 3.0), duodenum adult (RPKM 2.7) and 20 other tissues See more
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    Genomic context

    See Glt28d2 in Genome Data Viewer
    Location:
    3 F1; 3 37.83 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (85777153..85794825, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (85869846..85887518, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene FHF complex subunit HOOK interacting protein 1A Neighboring gene predicted gene, 40082 Neighboring gene STARR-seq mESC enhancer starr_08112 Neighboring gene proteasome (prosome, macropain) subunit, alpha type 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_08114 Neighboring gene predicted gene, 26204 Neighboring gene predicted gene 9790

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General protein information

    Preferred Names
    glycosyltransferase 28 domain containing 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177130.3NP_796104.2  glycosyltransferase 28 domain containing 1-like

      See identical proteins and their annotated locations for NP_796104.2

      Status: VALIDATED

      Source sequence(s)
      AK030588, BB008997, BB622267
      Consensus CDS
      CCDS17443.1
      UniProtKB/TrEMBL
      Q0VD95, Q8BML3, Q8C132
      Related
      ENSMUSP00000033643.6, ENSMUST00000033643.6
      Conserved Domains (1) summary
      cl10013
      Location:4120
      Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      85777153..85794825 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)