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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_017078.2 RefSeqGene
- Range
-
45348..83306
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001297419.1 → NP_001284348.1 DNA repair protein RAD52 homolog isoform a
See identical proteins and their annotated locations for NP_001284348.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same isoform (a, also known as alpha).
- Source sequence(s)
-
AA402047, AC004803, L33262
- Consensus CDS
-
CCDS8507.2
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
- Related
- ENSP00000387901.2, ENST00000430095.6
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
NM_001297420.1 → NP_001284349.1 DNA repair protein RAD52 homolog isoform b
See identical proteins and their annotated locations for NP_001284349.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks several coding exons, and contains an alternate exon in the coding region, resulting in a novel 3' coding region and 3' UTR compared to variant 1. The encoded isoform (b, also known as beta) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AC004803, AF125950
- Consensus CDS
-
CCDS76501.1
- UniProtKB/Swiss-Prot
-
P43351
- Related
- ENSP00000440268.1, ENST00000545564.5
- Conserved Domains (1) summary
-
- cl01936
Location:38 → 156
- Rad52_Rad22; Rad52/22 family double-strand break repair protein
-
NM_001297421.2 → NP_001284350.1 DNA repair protein RAD52 homolog isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream start codon compared to variant 1. The encoded isoform (c) has a shorter N-terminus compared to isoform a.
- Source sequence(s)
-
AA402047, AC004803, AK299283, HY045122
- UniProtKB/TrEMBL
-
B7Z5Q6
- Conserved Domains (1) summary
-
- cl42453
Location:1 → 122
- Rad52_Rad22; Rad52/22 family double-strand break repair protein
-
NM_001297422.2 → NP_001284351.1 DNA repair protein RAD52 homolog isoform d
See identical proteins and their annotated locations for NP_001284351.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks several coding exons and uses an alternate 3' terminal exon, resulting in a novel 3' coding region and 3' UTR compared to variant 1. The encoded isoform (d) has a distinct C-terminus and is shorter than isoform a.
- Source sequence(s)
-
AC004803, AK294709, HY045122
- Consensus CDS
-
CCDS76500.1
- UniProtKB/TrEMBL
- B7Z2G8, F5GX32
- Related
- ENSP00000440486.1, ENST00000536177.5
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
NM_134424.4 → NP_602296.2 DNA repair protein RAD52 homolog isoform a
See identical proteins and their annotated locations for NP_602296.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a, also known as alpha). Variants 1 and 2 encode the same isoform.
- Source sequence(s)
-
AA402047, AC004803, HY045122, U12134
- Consensus CDS
-
CCDS8507.2
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
- Related
- ENSP00000351284.3, ENST00000358495.8
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
RNA
-
NR_123713.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) contains two alternate internal exons, and uses an alternate splice site in an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AA402047, AC004803, BC042136, HY045122
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
911736..991122 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017019769.2 → XP_016875258.1 DNA repair protein RAD52 homolog isoform X1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
XM_005253720.6 → XP_005253777.1 DNA repair protein RAD52 homolog isoform X1
See identical proteins and their annotated locations for XP_005253777.1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
XM_047429285.1 → XP_047285241.1 DNA repair protein RAD52 homolog isoform X2
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_011520991.3 → XP_011519293.1 DNA repair protein RAD52 homolog isoform X1
See identical proteins and their annotated locations for XP_011519293.1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
XM_017019770.2 → XP_016875259.1 DNA repair protein RAD52 homolog isoform X2
- UniProtKB/TrEMBL
-
Q3MI84
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
XM_047429284.1 → XP_047285240.1 DNA repair protein RAD52 homolog isoform X2
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_011520990.3 → XP_011519292.1 DNA repair protein RAD52 homolog isoform X1
See identical proteins and their annotated locations for XP_011519292.1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
XM_047429283.1 → XP_047285239.1 DNA repair protein RAD52 homolog isoform X2
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_005253721.3 → XP_005253778.1 DNA repair protein RAD52 homolog isoform X1
See identical proteins and their annotated locations for XP_005253778.1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
XM_047429282.1 → XP_047285238.1 DNA repair protein RAD52 homolog isoform X1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
-
XM_011520995.4 → XP_011519297.1 DNA repair protein RAD52 homolog isoform X5
- UniProtKB/TrEMBL
-
B7Z5Q6
- Conserved Domains (1) summary
-
- cl01936
Location:14 → 101
- Rad52_Rad22; Rad52/22 family double-strand break repair protein
-
XM_047429286.1 → XP_047285242.1 DNA repair protein RAD52 homolog isoform X3
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_047429287.1 → XP_047285243.1 DNA repair protein RAD52 homolog isoform X4
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_047429290.1 → XP_047285246.1 DNA repair protein RAD52 homolog isoform X7
- UniProtKB/TrEMBL
-
B7Z2G8
-
XM_017019771.2 → XP_016875260.1 DNA repair protein RAD52 homolog isoform X6
- UniProtKB/TrEMBL
- B7Z2G8, F5GX32
- Conserved Domains (1) summary
-
- TIGR00607
Location:38 → 199
- rad52; recombination protein rad52
-
XM_047429288.1 → XP_047285244.1 DNA repair protein RAD52 homolog isoform X6
- UniProtKB/TrEMBL
- B7Z2G8, F5GX32
-
XM_047429289.1 → XP_047285245.1 DNA repair protein RAD52 homolog isoform X6
- UniProtKB/TrEMBL
- B7Z2G8, F5GX32
-
XM_047429291.1 → XP_047285247.1 DNA repair protein RAD52 homolog isoform X8
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
907492..985932 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054372784.1 → XP_054228759.1 DNA repair protein RAD52 homolog isoform X1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
-
XM_054372789.1 → XP_054228764.1 DNA repair protein RAD52 homolog isoform X2
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_054372782.1 → XP_054228757.1 DNA repair protein RAD52 homolog isoform X1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
-
XM_054372786.1 → XP_054228761.1 DNA repair protein RAD52 homolog isoform X2
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_054372788.1 → XP_054228763.1 DNA repair protein RAD52 homolog isoform X2
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_054372783.1 → XP_054228758.1 DNA repair protein RAD52 homolog isoform X1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
-
XM_054372787.1 → XP_054228762.1 DNA repair protein RAD52 homolog isoform X2
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_054372785.1 → XP_054228760.1 DNA repair protein RAD52 homolog isoform X1
- UniProtKB/Swiss-Prot
- P43351, Q13205, Q9Y5T7, Q9Y5T8, Q9Y5T9
- UniProtKB/TrEMBL
- Q3MI84, Q5DR82
-
XM_054372792.1 → XP_054228767.1 DNA repair protein RAD52 homolog isoform X5
- UniProtKB/TrEMBL
-
B7Z5Q6
-
XM_054372790.1 → XP_054228765.1 DNA repair protein RAD52 homolog isoform X3
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_054372791.1 → XP_054228766.1 DNA repair protein RAD52 homolog isoform X4
- UniProtKB/TrEMBL
-
Q3MI84
-
XM_054372796.1 → XP_054228771.1 DNA repair protein RAD52 homolog isoform X7
- UniProtKB/TrEMBL
-
B7Z2G8
-
XM_054372793.1 → XP_054228768.1 DNA repair protein RAD52 homolog isoform X6
- UniProtKB/TrEMBL
- B7Z2G8, F5GX32
-
XM_054372794.1 → XP_054228769.1 DNA repair protein RAD52 homolog isoform X6
- UniProtKB/TrEMBL
- B7Z2G8, F5GX32
-
XM_054372795.1 → XP_054228770.1 DNA repair protein RAD52 homolog isoform X6
- UniProtKB/TrEMBL
- B7Z2G8, F5GX32
-
XM_054372797.1 → XP_054228772.1 DNA repair protein RAD52 homolog isoform X8
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_134422.1: Suppressed sequence
- Description
- NM_134422.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
-
NM_134423.1: Suppressed sequence
- Description
- NM_134423.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.