U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    FGF14-AS1 FGF14 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 100874081, updated on 10-Dec-2024

    Summary

    Official Symbol
    FGF14-AS1provided by HGNC
    Official Full Name
    FGF14 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:40237
    See related
    AllianceGenome:HGNC:40237
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 2.2) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See FGF14-AS1 in Genome Data Viewer
    Location:
    13q33.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (102367530..102373666)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (101583544..101589680)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (103019880..103026016)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 14 Neighboring gene uncharacterized LOC107984615 Neighboring gene ribosomal protein L39 pseudogene 29 Neighboring gene FGF14 intronic transcript 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:102985874-102986457 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:103004521-103005022 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7964 Neighboring gene FGF14 antisense RNA 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7965 Neighboring gene H3K27ac-H3K4me1 hESC enhancers GRCh37_chr13:103244249-103244798 and GRCh37_chr13:103244799-103245346 Neighboring gene uncharacterized LOC107984588 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7968 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7969 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5481

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125912.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BX095866

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      102367530..102373666
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      101583544..101589680
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)