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    NINL ninein like [ Gallus gallus (chicken) ]

    Gene ID: 100859089, updated on 17-Aug-2024

    Summary

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    Symbol
    NINLprovided by CGNC
    Full Name
    ninein likeprovided by CGNC
    Primary source
    CGNC:64033
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NINL in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (16094300..16112087, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (16009510..16027170, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107052874 Neighboring gene solute carrier family 8 member A1 Neighboring gene microRNA 6563 Neighboring gene GINS complex subunit 1 Neighboring gene eukaryotic translation initiation factor 4A3 Neighboring gene atlastin GTPase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in microtubule anchoring at centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ninein-like protein
    Names
    ninein-like protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      16094300..16112087 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046939550.1 → XP_046795506.1  ninein-like protein isoform X10

    2. XM_040698219.2 → XP_040554153.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. XM_046939549.1 → XP_046795505.1  ninein-like protein isoform X5

    4. XM_040698218.2 → XP_040554152.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    5. XM_040698217.2 → XP_040554151.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    6. XM_040698216.2 → XP_040554150.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    7. XM_040698215.2 → XP_040554149.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    8. XM_046939551.1 → XP_046795507.1  ninein-like protein isoform X11

    9. XM_040698223.2 → XP_040554157.1  ninein-like protein isoform X5

      Conserved Domains (2) summary
      COG1196
      Location:10 → 287
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:356 → 596
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    10. XM_040698226.2 → XP_040554160.1  ninein-like protein isoform X9

      Conserved Domains (2) summary
      TIGR02168
      Location:305 → 545
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:38 → 341
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    11. XM_040698220.2 → XP_040554154.1  ninein-like protein isoform X2

      Conserved Domains (2) summary
      COG1196
      Location:48 → 325
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:394 → 634
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    12. XM_040698225.2 → XP_040554159.1  ninein-like protein isoform X8

      Conserved Domains (2) summary
      COG1196
      Location:49 → 315
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:385 → 566
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    13. XM_040698222.2 → XP_040554156.1  ninein-like protein isoform X4

      Conserved Domains (2) summary
      COG1196
      Location:49 → 293
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:362 → 602
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    14. XM_040698221.2 → XP_040554155.1  ninein-like protein isoform X3

      Conserved Domains (2) summary
      COG1196
      Location:49 → 323
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:392 → 632
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    15. XM_040698224.2 → XP_040554158.1  ninein-like protein isoform X6

      Conserved Domains (1) summary
      TIGR02168
      Location:340 → 580
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    16. XM_015283552.4 → XP_015139038.3  ninein-like protein isoform X7

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:221 → 518
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    17. XM_015283565.4 → XP_015139051.3  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      16009510..16027170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046915075.1 → XP_046771031.1  ninein-like protein isoform X10

    2. XM_040668074.2 → XP_040524008.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. XM_040668085.2 → XP_040524019.1  ninein-like protein isoform X11

      Conserved Domains (2) summary
      TIGR02168
      Location:282 → 522
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:15 → 318
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    4. XM_046915076.1 → XP_046771032.1  ninein-like protein isoform X11

    5. XM_046915074.1 → XP_046771030.1  ninein-like protein isoform X5

    6. XM_040668077.2 → XP_040524011.1  ninein-like protein isoform X12

      Conserved Domains (2) summary
      COG1196
      Location:48 → 322
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:391 → 631
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    7. XM_040668069.2 → XP_040524003.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    8. XM_040668073.2 → XP_040524007.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    9. XM_040668072.2 → XP_040524006.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    10. XM_040668071.2 → XP_040524005.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    11. XM_040668070.2 → XP_040524004.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    12. XM_040668083.2 → XP_040524017.1  ninein-like protein isoform X9

      Conserved Domains (2) summary
      TIGR02168
      Location:305 → 545
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:38 → 341
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    13. XM_040668075.2 → XP_040524009.1  ninein-like protein isoform X2

      Conserved Domains (2) summary
      COG1196
      Location:48 → 325
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:394 → 634
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    14. XM_040668082.2 → XP_040524016.1  ninein-like protein isoform X8

      Conserved Domains (2) summary
      COG1196
      Location:49 → 315
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:385 → 566
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    15. XM_040668078.2 → XP_040524012.1  ninein-like protein isoform X4

      Conserved Domains (2) summary
      COG1196
      Location:49 → 293
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:362 → 602
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    16. XM_040668076.2 → XP_040524010.1  ninein-like protein isoform X3

      Conserved Domains (2) summary
      COG1196
      Location:49 → 323
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:392 → 632
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    17. XM_040668080.2 → XP_040524014.1  ninein-like protein isoform X6

      Conserved Domains (1) summary
      TIGR02168
      Location:340 → 580
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    18. XM_040668081.2 → XP_040524015.1  ninein-like protein isoform X7

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:221 → 518
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    19. XM_040668068.2 → XP_040524002.1  ninein-like protein isoform X1

      Conserved Domains (2) summary
      COG1196
      Location:49 → 326
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:395 → 635
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein Strain
    Heading Accession and Version

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