U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TMEM116 transmembrane protein 116 [ Gallus gallus (chicken) ]

    Gene ID: 416881, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    TMEM116provided by CGNC
    Full Name
    transmembrane protein 116provided by CGNC
    Primary source
    CGNC:3531
    See related
    Ensembl:ENSGALG00010025924
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TMEM116 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 15 NC_052546.1 (6263012..6276738, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 15 NC_052587.1 (6273758..6287475, complement)

    Chromosome 15 - NC_052546.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106893 Neighboring gene disintegrin and metalloproteinase domain-containing protein 9-like Neighboring gene ADAM metallopeptidase domain 20-like Neighboring gene endoplasmic reticulum protein 29 Neighboring gene N(alpha)-acetyltransferase 25, NatB auxiliary subunit Neighboring gene TRAF-type zinc finger domain containing 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transmembrane protein 116

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052546.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6263012..6276738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004945604.5 → XP_004945661.1  transmembrane protein 116 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AC22
      Conserved Domains (2) summary
      cd14964
      Location:266 → 291
      7tm_GPCRs; TM helix 6 [structural motif]
      cl28897
      Location:220 → 326
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    2. XM_015275547.4 → XP_015131033.2  transmembrane protein 116 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A9Q4
      Related
      ENSGALP00010039006.1, ENSGALT00010063192.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052587.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6273758..6287475 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040684640.2 → XP_040540574.1  transmembrane protein 116 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AC22
      Conserved Domains (2) summary
      cd14964
      Location:266 → 291
      7tm_GPCRs; TM helix 6 [structural motif]
      cl28897
      Location:220 → 326
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily

    2. XM_040684641.2 → XP_040540575.2  transmembrane protein 116 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A9Q4
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials